RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ITIH2P19823 946 aa18.25■□□□□ 0.51
SSBP3-203ENST00000371319 HSD17B3P37058 310 aa18.25■□□□□ 0.51
SSBP3-203ENST00000371319 GGCXP38435 758 aa18.25■□□□□ 0.51
SSBP3-203ENST00000371319 GPS2Q13227 327 aa18.25■□□□□ 0.51
SSBP3-203ENST00000371319 IKBKEQ14164 716 aa18.25■□□□□ 0.51
SSBP3-203ENST00000371319 CTXN3Q4LDR2 81 aa18.25■□□□□ 0.51
SSBP3-203ENST00000371319 SLC9A4Q6AI14 798 aa18.25■□□□□ 0.51
SSBP3-203ENST00000371319 GSTA5Q7RTV2 222 aa18.25■□□□□ 0.51
SSBP3-203ENST00000371319 TMEM173Q86WV6 379 aaPredicted RBP18.25■□□□□ 0.51
SSBP3-203ENST00000371319 B3GALT6Q96L58 329 aa18.25■□□□□ 0.51
SSBP3-203ENST00000371319 ZIM3Q96PE6 472 aa18.25■□□□□ 0.51
SSBP3-203ENST00000371319 DHX35Q9H5Z1 703 aaKnown RBP18.25■□□□□ 0.51
SSBP3-203ENST00000371319 SF3B1O75533 1304 aaKnown RBP eCLIP18.24■□□□□ 0.514e-6■■■■■ 92.4
SSBP3-203ENST00000371319 MYO16Q9Y6X6 1858 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 OR6C75A6NL08 312 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 ETS1P14921 441 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 GRIK1P39086 918 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 ADCY8P40145 1251 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 PBX3P40426 434 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 C1QTNF8P60827 252 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 DEUP1Q05D60 604 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 DHX9Q08211 1270 aaKnown RBP18.24■□□□□ 0.51
SSBP3-203ENST00000371319 CALCOCO2Q13137 446 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 NOMO1Q15155 1222 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 CFAP58Q5T655 872 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 CEP57Q86XR8 500 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 PSTKQ8IV42 348 aaKnown RBP18.24■□□□□ 0.51
SSBP3-203ENST00000371319 PLD5Q8N7P1 536 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 CCDC89Q8N998 374 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 SCAMP5Q8TAC9 235 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 SLC7A14Q8TBB6 771 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 PGAP3Q96FM1 320 aaPredicted RBP18.24■□□□□ 0.51
SSBP3-203ENST00000371319 TMEM121Q9BTD3 319 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 CWH43Q9H720 699 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 PIGVQ9NUD9 493 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 PLXNA3P51805 1871 aa18.24■□□□□ 0.51
SSBP3-203ENST00000371319 APOL1O14791 398 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 CAPN9O14815 690 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 TBC1D4O60343 1298 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 UPP2O95045 317 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 EFEMP2O95967 443 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 ZSCAN5DPP0CG00 497 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 NCAM1P13591 858 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 TGM2P21980 687 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 VPS41P49754 854 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 ITGA8P53708 1063 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 SLC5A3P53794 718 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 EIF3EP60228 445 aaKnown RBP18.23■□□□□ 0.51
SSBP3-203ENST00000371319 FAM193AP78312 1265 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 PKN2Q16513 984 aaKnown RBP18.23■□□□□ 0.51
SSBP3-203ENST00000371319 NFE2Q16621 373 aaPredicted RBP18.23■□□□□ 0.51
SSBP3-203ENST00000371319 PPP6R3Q5H9R7 873 aaPredicted RBP18.23■□□□□ 0.51
SSBP3-203ENST00000371319 ZNF280DQ6N043 979 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 TAS1R1Q7RTX1 841 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 PYROXD2Q8N2H3 581 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 FUBP3Q96I24 572 aaKnown RBP eCLIP18.23■□□□□ 0.51
SSBP3-203ENST00000371319 C10orf88Q9H8K7 445 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 WDR6Q9NNW5 1121 aaKnown RBP18.23■□□□□ 0.51
SSBP3-203ENST00000371319 MED4Q9NPJ6 270 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 TMPRSS4Q9NRS4 437 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 ABI2Q9NYB9 513 aaPredicted RBP18.23■□□□□ 0.51
SSBP3-203ENST00000371319 RRN3Q9NYV6 651 aa18.23■□□□□ 0.51
SSBP3-203ENST00000371319 MTRF1LQ9UGC7 380 aaKnown RBP18.23■□□□□ 0.51
SSBP3-203ENST00000371319 SYNJ2BP-COX16A0A087WUM0 186 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 TRIM43BA6NCK2 446 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 DGKIO75912 1065 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 ITGB8P26012 769 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 MAGEA11P43364 429 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 ELAVL2Q12926 359 aaKnown RBP18.22■□□□□ 0.51
SSBP3-203ENST00000371319 NME3Q13232 169 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 MTMR3Q13615 1198 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 SPDYCQ5MJ68 293 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 RTP2Q5QGT7 225 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 IZUMO3Q5VZ72 239 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 BSPRYQ5W0U4 402 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 C1orf228Q6PIY5 440 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 BEND5Q7L4P6 421 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 ADAM32Q8TC27 787 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 CCHCR1Q8TD31 782 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.22■□□□□ 0.51
SSBP3-203ENST00000371319 RIN2Q8WYP3 895 aaPredicted RBP18.22■□□□□ 0.51
SSBP3-203ENST00000371319 EDEM1Q92611 657 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 TRIM43Q96BQ3 446 aaPredicted RBP18.22■□□□□ 0.51
SSBP3-203ENST00000371319 C8orf48Q96LL4 319 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 SH3GL2Q99962 352 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 PCDH9Q9HC56 1237 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 AAASQ9NRG9 546 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 COX16Q9P0S2 106 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 PCDHB5Q9Y5E4 795 aa18.22■□□□□ 0.51
SSBP3-203ENST00000371319 ZNF638Q14966 1978 aaKnown RBP18.22■□□□□ 0.51
SSBP3-203ENST00000371319 H0YGN5 161 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 SGK1O00141 431 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 MCF2LO15068 1137 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 GPR15P49685 360 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 GDF10P55107 478 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 CAV1Q03135 178 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 VSTM1Q6UX27 236 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 RSPO2Q6UXX9 243 aaPredicted RBP18.21■□□□□ 0.51
SSBP3-203ENST00000371319 SCN4BQ8IWT1 228 aa18.21■□□□□ 0.51
SSBP3-203ENST00000371319 BBOF1Q8ND07 529 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms