RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ALG3Q92685 438 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 HPS1Q92902 700 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 ARHGEF3Q9NR81 526 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 RUVBL2Q9Y230 463 aaKnown RBP13.07□□□□□ -0.32
GPC4-201ENST00000370828 NOD1Q9Y239 953 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 INPP4BO15327 924 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 TGM2P21980 687 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 SFNP31947 248 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 CCDC142Q17RM4 750 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 ARMC4Q5T2S8 1044 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 LRRC55Q6ZSA7 311 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 LRRC39Q96DD0 335 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 MAF1Q9H063 256 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 CASS4Q9NQ75 786 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 M0QZ92 97 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 MAP3K13O43283 966 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 FAM86B2P0C5J1 330 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 CREB1P16220 341 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.07□□□□□ -0.32
GPC4-201ENST00000370828 SYTL1Q8IYJ3 562 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 PPHLN1Q8NEY8 458 aaKnown RBP13.07□□□□□ -0.32
GPC4-201ENST00000370828 LNX1Q8TBB1 728 aaPredicted RBP13.07□□□□□ -0.32
GPC4-201ENST00000370828 UBA3Q8TBC4 463 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 RNF139Q8WU17 664 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 IFT43Q96FT9 208 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 RERGLQ9H628 205 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 TOPORSQ9NS56 1045 aaPredicted RBP13.07□□□□□ -0.32
GPC4-201ENST00000370828 ZNF335Q9H4Z2 1342 aaPredicted RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 E5RI56 91 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 POLRMTO00411 1230 aaKnown RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 CLEC16AQ2KHT3 1053 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 TRABD2AQ86V40 505 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 FNIP1Q8TF40 1166 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 PSPC1Q8WXF1 523 aaKnown RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 TMEM143Q96AN5 459 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 TLCD1Q96CP7 247 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 SLC10A4Q96EP9 437 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 AGBL1Q96MI9 1066 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 THUMPD3Q9BV44 507 aaKnown RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 ROGDIQ9GZN7 287 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 AS3MTQ9HBK9 375 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 KCND2Q9NZV8 630 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 RNF103O00237 685 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 VCLP18206 1134 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 IFNA8P32881 189 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 GNL1P36915 607 aaPredicted RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 PRKCIP41743 596 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 IL12RB1P42701 662 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 RFWD3Q6PCD5 774 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 SZRD1Q7Z422 152 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 PTAR1Q7Z6K3 402 aaPredicted RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 ACP6Q9NPH0 428 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 GPATCH2LQ9NWQ4 482 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 PLA2G4CQ9UP65 541 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 A2ML1A8K2U0 1454 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 C5orf60A6NFR6 353 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 TRIM64A6NGJ6 449 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 TRIM64BA6NI03 449 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 PRR5-ARHGAP8B1AHC4 643 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 GPD1P21695 349 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 PTGER2P43116 358 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 ARHGAP8P85298 464 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 IL5RAQ01344 420 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 FAM83EQ2M2I3 478 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 NEK5Q6P3R8 708 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 STK32CQ86UX6 486 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 MCOLN2Q8IZK6 566 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 RMDN1Q96DB5 314 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 MTG1Q9BT17 334 aaPredicted RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 MRPL4Q9BYD3 311 aaKnown RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 NMUR2Q9GZQ4 415 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 E9PCH4 1651 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 ZMYM2Q9UBW7 1377 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 NOTOA8MTQ0 251 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 MSH4O15457 936 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 TLR2O60603 784 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 APOA4P06727 396 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 MSX2P35548 267 aaPredicted RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 PUDPQ08623 228 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 NFYCQ13952 458 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 KIZQ2M2Z5 673 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 STRA8Q7Z7C7 330 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 CERKQ8TCT0 537 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 SEMA4DQ92854 862 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 ZNF341Q9BYN7 854 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 C8orf4Q9NR00 106 aa13.06□□□□□ -0.32
GPC4-201ENST00000370828 NKX1-2Q9UD57 310 aaPredicted RBP13.06□□□□□ -0.32
GPC4-201ENST00000370828 CROCC2H7BZ55 1655 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 SDR42E2A6NKP2 422 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 WNT7AO00755 349 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 GJB6O95452 261 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 PTPN7P35236 360 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 RAD23AP54725 363 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 CUL2Q13617 745 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 IL17AQ16552 155 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 ARMCX4Q5H9R4 360 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 EGFLAMQ63HQ2 1017 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms