RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 GON4LQ3T8J9 2241 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 A0A1W2PQ27 194 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 A0A1W2PQ64 194 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 A0A1W2PQD8 194 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 WASH3PC4AMC7 463 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 TULP2O00295 520 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 KHNYNO15037 678 aaKnown RBP13.86□□□□□ -0.19
RPF1-201ENST00000370654 CACNG3O60359 315 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 STC2O76061 302 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 TOP3BO95985 862 aaKnown RBP13.86□□□□□ -0.19
RPF1-201ENST00000370654 TYRP14679 529 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 PSMC2P35998 433 aaKnown RBP13.86□□□□□ -0.19
RPF1-201ENST00000370654 PNOCQ13519 176 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 HSF5Q4G112 596 aaPredicted RBP13.86□□□□□ -0.19
RPF1-201ENST00000370654 BTBD8Q5XKL5 378 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 INTS8Q75QN2 995 aaKnown RBP13.86□□□□□ -0.19
RPF1-201ENST00000370654 PGBD3Q8N328 593 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 SLC4A11Q8NBS3 891 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 NDRG1Q92597 394 aaKnown RBP13.86□□□□□ -0.19
RPF1-201ENST00000370654 ERCC4Q92889 916 aaPredicted RBP13.86□□□□□ -0.19
RPF1-201ENST00000370654 BBS2Q9BXC9 721 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 DUSP16Q9BY84 665 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 TMEM8AQ9HCN3 771 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 USP3Q9Y6I4 520 aa13.86□□□□□ -0.19
RPF1-201ENST00000370654 ALDH1A2O94788 518 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 KIF20AO95235 890 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 HMBSP08397 361 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 ITPKAP23677 461 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 PMS1P54277 932 aaKnown RBP13.85□□□□□ -0.19
RPF1-201ENST00000370654 RAD23BP54727 409 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 C10orf120Q5SQS8 335 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 GRAMD4Q6IC98 578 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 DDX1Q92499 740 aaKnown RBP13.85□□□□□ -0.19
RPF1-201ENST00000370654 HEXIM2Q96MH2 286 aaKnown RBP13.85□□□□□ -0.19
RPF1-201ENST00000370654 MARK1Q9P0L2 795 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 CALCOCO1Q9P1Z2 691 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 NAGPAQ9UK23 515 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 CLEC4EQ9ULY5 219 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 STARD13Q9Y3M8 1113 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 PCDHA5Q9Y5H7 936 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 CHD8Q9HCK8 2581 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 PLXND1Q9Y4D7 1925 aa13.85□□□□□ -0.19
RPF1-201ENST00000370654 MAP3K13O43283 966 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 KRT13P13646 458 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 HOXB2P14652 356 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 NDUFV2P19404 249 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 SPINK2P20155 84 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 PRCPP42785 496 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 NOVA1P51513 510 aaKnown RBP13.84□□□□□ -0.19
RPF1-201ENST00000370654 ST3GAL2Q16842 350 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 CBWD6Q4V339 395 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 CBWD3Q5JTY5 395 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 CBWD5Q5RIA9 395 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 SH3PXD2AQ5TCZ1 1133 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 KRT39Q6A163 491 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 KLHDC10Q6PID8 442 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 LPCAT2Q7L5N7 544 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 BHLHA9Q7RTU4 235 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 CCDC186Q7Z3E2 898 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 C11orf74Q86VG3 221 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 PNPLA8Q9NP80 782 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 CISHQ9NSE2 258 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 CACNA2D2Q9NY47 1150 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 DNMT3LQ9UJW3 386 aa13.84□□□□□ -0.19
RPF1-201ENST00000370654 NTSR1P30989 418 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 PLA2G4AP47712 749 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 EFEMP1Q12805 493 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 UAP1L1Q3KQV9 507 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 TRIM61Q5EBN2 209 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 PIGZQ86VD9 579 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 SLC41A1Q8IVJ1 513 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.19
RPF1-201ENST00000370654 TMEM176AQ96HP8 235 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 IMPG2Q9BZV3 1241 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 TMEM9BQ9NQ34 198 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 RAB20Q9NX57 234 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 RASAL2Q9UJF2 1139 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 FBXO10Q9UK96 956 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 PILRBQ9UKJ0 227 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 ANGPTL2Q9UKU9 493 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 ZFHX4Q86UP3 3567 aa13.83□□□□□ -0.19
RPF1-201ENST00000370654 ADAMTS9Q9P2N4 1935 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 ASCC3Q8N3C0 2202 aaKnown RBP13.83□□□□□ -0.2
RPF1-201ENST00000370654 IGHV1OR15-9A0A0B4J2B8 117 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 TRIM49BA6NDI0 452 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 RPL13P26373 211 aaKnown RBP13.83□□□□□ -0.2
RPF1-201ENST00000370654 GTF2H1P32780 548 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 MAPK8P45983 427 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 DGKGP49619 791 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 MXI1P50539 228 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 SHC2P98077 582 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 ENPEPQ07075 957 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 GEN1Q17RS7 908 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 EDRF1Q3B7T1 1238 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 RAB41Q5JT25 222 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 FYB2Q5VWT5 728 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 SYT12Q8IV01 421 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 CHPFQ8IZ52 775 aa13.83□□□□□ -0.2
RPF1-201ENST00000370654 FMR1NBQ8N0W7 255 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms