RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 STRIP2Q9ULQ0 834 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 MYOFQ9NZM1 2061 aa16.98■□□□□ 0.31
VMA21-202ENST00000370361 SDK1Q7Z5N4 2213 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 A0A1W2PQH9 124 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 GFRA2O00451 464 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 PSMA7O14818 248 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 SCAMP3O14828 347 aaKnown RBP16.97■□□□□ 0.31
VMA21-202ENST00000370361 TM4SF5O14894 197 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 KHNYNO15037 678 aaKnown RBP16.97■□□□□ 0.31
VMA21-202ENST00000370361 TYRP14679 529 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 TBXAS1P24557 533 aaPredicted RBP16.97■□□□□ 0.31
VMA21-202ENST00000370361 NTSR1P30989 418 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 PRCPP42785 496 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 ZNF132P52740 706 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 PNOCQ13519 176 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 RNF43Q68DV7 783 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 FOXR2Q6PJQ5 311 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 TMEM92Q6UXU6 159 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 SLC36A4Q6YBV0 504 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 Q6ZNB5 142 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 RABEPKQ7Z6M1 372 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 ANKRD52Q8NB46 1076 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 TPSD1Q9BZJ3 242 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 OLA1Q9NTK5 396 aaKnown RBP16.97■□□□□ 0.31
VMA21-202ENST00000370361 OSER1Q9NX31 292 aa16.97■□□□□ 0.31
VMA21-202ENST00000370361 ARMCX3Q9UH62 379 aaPredicted RBP16.97■□□□□ 0.31
VMA21-202ENST00000370361 EVLQ9UI08 416 aaPredicted RBP16.97■□□□□ 0.31
VMA21-202ENST00000370361 NEDD8-MDP1E9PL57 170 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 DCLK1O15075 740 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 PMM2O15305 246 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 MAP3K13O43283 966 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 ADAM23O75077 832 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 ZNF217O75362 1048 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 BCAT1P54687 386 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 RAD23BP54727 409 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 ZNF445P59923 1031 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 LMAN2Q12907 356 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 RAB41Q5JT25 222 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 TCERG1LQ5VWI1 586 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 DAB2IPQ5VWQ8 1189 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 NAT16Q8N8M0 369 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 SLC4A11Q8NBS3 891 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 SEMA4DQ92854 862 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 JAKMIP2Q96AA8 810 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 EDEM2Q9BV94 578 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 LSM14BQ9BX40 385 aaKnown RBP16.96■□□□□ 0.31
VMA21-202ENST00000370361 NMUR1Q9HB89 426 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 HESX1Q9UBX0 185 aa16.96■□□□□ 0.31
VMA21-202ENST00000370361 NUP205Q92621 2012 aa16.96■□□□□ 0.3
VMA21-202ENST00000370361 THADAQ6YHU6 1953 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 TCRBV21S2A2A0A5A6 115 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 AP5Z1O43299 807 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 STC2O76061 302 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 TBX18O95935 607 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 HOXB2P14652 356 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 DGKGP49619 791 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 PGFP49763 221 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 MESP2Q0VG99 397 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 CETN1Q12798 172 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 CUL2Q13617 745 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 ZNF394Q53GI3 561 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
VMA21-202ENST00000370361 SCD5Q86SK9 330 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 TTC30AQ86WT1 665 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 SMYD4Q8IYR2 804 aaPredicted RBP16.95■□□□□ 0.3
VMA21-202ENST00000370361 ENGASEQ8NFI3 743 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 HMGB4Q8WW32 186 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 DHTKD1Q96HY7 919 aaPredicted RBP16.95■□□□□ 0.3
VMA21-202ENST00000370361 CEP63Q96MT8 703 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 SLC27A6Q9Y2P4 619 aa16.95■□□□□ 0.3
VMA21-202ENST00000370361 SPTBN2O15020 2390 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 MYO18AQ92614 2054 aaKnown RBP16.94■□□□□ 0.3
VMA21-202ENST00000370361 XPO1O14980 1071 aaKnown RBP16.94■□□□□ 0.3
VMA21-202ENST00000370361 CYBBP04839 570 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 SETSIPP0DME0 302 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 HNRNPLP14866 589 aaKnown RBP eCLIP16.94■□□□□ 0.3
VMA21-202ENST00000370361 DHPSP49366 369 aaPredicted RBP16.94■□□□□ 0.3
VMA21-202ENST00000370361 BST2Q10589 180 aaKnown RBP16.94■□□□□ 0.3
VMA21-202ENST00000370361 STILQ15468 1287 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 CCDC6Q16204 474 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 SGO2Q562F6 1265 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 EMC10Q5UCC4 262 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 PM20D1Q6GTS8 502 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 RSRC2Q7L4I2 434 aaKnown RBP16.94■□□□□ 0.3
VMA21-202ENST00000370361 PIGZQ86VD9 579 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 SYT12Q8IV01 421 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 SFTPA1Q8IWL2 248 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 CHPFQ8IZ52 775 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 SCML4Q8N228 414 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 PGBD3Q8N328 593 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 CPXM2Q8N436 756 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 CEP76Q8TAP6 659 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 UCMAQ8WVF2 138 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 PLD4Q96BZ4 506 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 GABRG3Q99928 467 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 SLC2A11Q9BYW1 496 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 FBXO10Q9UK96 956 aa16.94■□□□□ 0.3
VMA21-202ENST00000370361 LNP1A1A4G5 178 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 P4HA2O15460 535 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 ZBED1O96006 694 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms