RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 AKAP5P24588 427 aa8.81□□□□□ -1
LCA5-201ENST00000369846 CCT8P50990 548 aa8.81□□□□□ -1
LCA5-201ENST00000369846 HK2P52789 917 aa8.81□□□□□ -1
LCA5-201ENST00000369846 RTP1P59025 263 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PHC1P78364 1004 aa8.81□□□□□ -1
LCA5-201ENST00000369846 USF2Q15853 346 aaPredicted RBP8.81□□□□□ -1
LCA5-201ENST00000369846 HMBOX1Q6NT76 420 aa8.81□□□□□ -1
LCA5-201ENST00000369846 DENND5BQ6ZUT9 1274 aa8.81□□□□□ -1
LCA5-201ENST00000369846 NET1Q7Z628 596 aaPredicted RBP8.81□□□□□ -1
LCA5-201ENST00000369846 SLCO6A1Q86UG4 719 aa8.81□□□□□ -1
LCA5-201ENST00000369846 SATL1Q86VE3 508 aa8.81□□□□□ -1
LCA5-201ENST00000369846 GPD1LQ8N335 351 aa8.81□□□□□ -1
LCA5-201ENST00000369846 TRPC4APQ8TEL6 797 aa8.81□□□□□ -1
LCA5-201ENST00000369846 UCMAQ8WVF2 138 aa8.81□□□□□ -1
LCA5-201ENST00000369846 LY9Q9HBG7 655 aa8.81□□□□□ -1
LCA5-201ENST00000369846 DNAJC11Q9NVH1 559 aa8.81□□□□□ -1
LCA5-201ENST00000369846 TMEM260Q9NX78 707 aa8.81□□□□□ -1
LCA5-201ENST00000369846 STK32BQ9NY57 414 aa8.81□□□□□ -1
LCA5-201ENST00000369846 SLC24A2Q9UI40 661 aa8.81□□□□□ -1
LCA5-201ENST00000369846 USP17L15C9J2P7 530 aa8.81□□□□□ -1
LCA5-201ENST00000369846 USP17L13C9JLJ4 530 aa8.81□□□□□ -1
LCA5-201ENST00000369846 USP17L11C9JVI0 530 aa8.81□□□□□ -1
LCA5-201ENST00000369846 USP17L18D6R9N7 530 aa8.81□□□□□ -1
LCA5-201ENST00000369846 USP17L22D6RA61 530 aa8.81□□□□□ -1
LCA5-201ENST00000369846 USP17L17D6RBQ6 530 aa8.81□□□□□ -1
LCA5-201ENST00000369846 USP17L19D6RCP7 530 aa8.81□□□□□ -1
LCA5-201ENST00000369846 USP17L20D6RJB6 530 aa8.81□□□□□ -1
LCA5-201ENST00000369846 ARIH2O95376 493 aa8.81□□□□□ -1
LCA5-201ENST00000369846 GCP02774 474 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PRKCBP05771 671 aa8.81□□□□□ -1
LCA5-201ENST00000369846 BMP3P12645 472 aa8.81□□□□□ -1
LCA5-201ENST00000369846 POLR2EP19388 210 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 GTF2H1P32780 548 aa8.81□□□□□ -1
LCA5-201ENST00000369846 FEN1P39748 380 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 BTDP43251 543 aa8.81□□□□□ -1
LCA5-201ENST00000369846 RPL21P46778 160 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 FMO5P49326 533 aa8.81□□□□□ -1
LCA5-201ENST00000369846 RPS8P62241 208 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 SCRN3Q0VDG4 424 aa8.81□□□□□ -1
LCA5-201ENST00000369846 USP17L24Q0WX57 530 aa8.81□□□□□ -1
LCA5-201ENST00000369846 ATP6AP1LQ52LC2 224 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PADI6Q6TGC4 694 aa8.81□□□□□ -1
LCA5-201ENST00000369846 ARMCX2Q7L311 632 aa8.81□□□□□ -1
LCA5-201ENST00000369846 SLC26A11Q86WA9 606 aa8.81□□□□□ -1
LCA5-201ENST00000369846 ZDHHC13Q8IUH4 622 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PHC2Q8IXK0 858 aa8.81□□□□□ -1
LCA5-201ENST00000369846 IZUMO1Q8IYV9 350 aa8.81□□□□□ -1
LCA5-201ENST00000369846 GSTCDQ8NEC7 633 aa8.81□□□□□ -1
LCA5-201ENST00000369846 BEST2Q8NFU1 509 aa8.81□□□□□ -1
LCA5-201ENST00000369846 MCFD2Q8NI22 146 aa8.81□□□□□ -1
LCA5-201ENST00000369846 SYTL5Q8TDW5 730 aaPredicted RBP8.81□□□□□ -1
LCA5-201ENST00000369846 SCFD2Q8WU76 684 aa8.81□□□□□ -1
LCA5-201ENST00000369846 BHMTQ93088 406 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PPP1R16BQ96T49 567 aa8.81□□□□□ -1
LCA5-201ENST00000369846 UBXN6Q9BZV1 441 aa8.81□□□□□ -1
LCA5-201ENST00000369846 WDR12Q9GZL7 423 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 CHMP1AQ9HD42 196 aaPredicted RBP8.81□□□□□ -1
LCA5-201ENST00000369846 CIDEBQ9UHD4 219 aa8.81□□□□□ -1
LCA5-201ENST00000369846 VAV3Q9UKW4 847 aa8.81□□□□□ -1
LCA5-201ENST00000369846 XRN1Q8IZH2 1706 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 FAM237BA0A1B0GVD1 139 aa8.81□□□□□ -1
LCA5-201ENST00000369846 C3orf70A6NLC5 250 aaPredicted RBP8.81□□□□□ -1
LCA5-201ENST00000369846 ZNF197O14709 1029 aa8.81□□□□□ -1
LCA5-201ENST00000369846 SPTLC1O15269 473 aa8.81□□□□□ -1
LCA5-201ENST00000369846 CAMTA2O94983 1202 aa8.81□□□□□ -1
LCA5-201ENST00000369846 STAT3P40763 770 aa8.81□□□□□ -1
LCA5-201ENST00000369846 STARP49675 285 aa8.81□□□□□ -1
LCA5-201ENST00000369846 NME3Q13232 169 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PDCD4Q53EL6 469 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 RNF43Q68DV7 783 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PRMT9Q6P2P2 845 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PLET1Q6UQ28 207 aa8.81□□□□□ -1
LCA5-201ENST00000369846 CHSY1Q86X52 802 aa8.81□□□□□ -1
LCA5-201ENST00000369846 HIPK1Q86Z02 1210 aa8.81□□□□□ -1
LCA5-201ENST00000369846 CENPLQ8N0S6 344 aaPredicted RBP8.81□□□□□ -1
LCA5-201ENST00000369846 LSM14AQ8ND56 463 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 CENPIQ92674 756 aaPredicted RBP8.81□□□□□ -1
LCA5-201ENST00000369846 OSBPL6Q9BZF3 934 aa8.81□□□□□ -1
LCA5-201ENST00000369846 CLK4Q9HAZ1 481 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 PNPLA3Q9NST1 481 aa8.81□□□□□ -1
LCA5-201ENST00000369846 RIC8BQ9NVN3 520 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PTTG2Q9NZH5 202 aa8.81□□□□□ -1
LCA5-201ENST00000369846 CCDC167Q9P0B6 97 aa8.81□□□□□ -1
LCA5-201ENST00000369846 RPS6KL1Q9Y6S9 549 aa8.81□□□□□ -1
LCA5-201ENST00000369846 ROBO2Q9HCK4 1378 aa8.81□□□□□ -1
LCA5-201ENST00000369846 SUPT3HB4E1H0 165 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PDLIM1O00151 329 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PDXKO00764 312 aa8.81□□□□□ -1
LCA5-201ENST00000369846 UBDO15205 165 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PDGFRAP16234 1089 aa8.81□□□□□ -1
LCA5-201ENST00000369846 ADSSP30520 456 aa8.81□□□□□ -1
LCA5-201ENST00000369846 SSTR1P30872 391 aa8.81□□□□□ -1
LCA5-201ENST00000369846 PTENP60484 403 aa8.81□□□□□ -1
LCA5-201ENST00000369846 GRSF1Q12849 480 aaKnown RBP eCLIP8.81□□□□□ -1
LCA5-201ENST00000369846 NFX1Q12986 1120 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 EFR3AQ14156 821 aa8.81□□□□□ -1
LCA5-201ENST00000369846 TYSND1Q2T9J0 566 aa8.81□□□□□ -1
LCA5-201ENST00000369846 C15orf59Q2T9L4 293 aaPredicted RBP8.81□□□□□ -1
LCA5-201ENST00000369846 FAM98BQ52LJ0 330 aaKnown RBP8.81□□□□□ -1
LCA5-201ENST00000369846 C2CD6Q53TS8 623 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms