RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 TAP1Q03518 808 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 XRRA1Q6P2D8 792 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 MPZL3Q6UWV2 235 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 PYROXD2Q8N2H3 581 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 CMASQ8NFW8 434 aaPredicted RBP11.3□□□□□ -0.6
LRIF1-201ENST00000369763 PCDH19Q8TAB3 1148 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 ALKBH8Q96BT7 664 aaKnown RBP11.3□□□□□ -0.6
LRIF1-201ENST00000369763 PGBD4Q96DM1 585 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 HPDLQ96IR7 371 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 SPATA33Q96N06 139 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 ZNF518BQ9C0D4 1074 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 AS3MTQ9HBK9 375 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 SPATS2LQ9NUQ6 558 aaKnown RBP11.3□□□□□ -0.6
LRIF1-201ENST00000369763 AKT3Q9Y243 479 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 C2CD2Q9Y426 696 aa11.3□□□□□ -0.6
LRIF1-201ENST00000369763 WDR27A2RRH5 827 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 E7ESA3 106 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 AP1G2O75843 785 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 PIGRP01833 764 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 RARBP10826 455 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 GPD2P43304 727 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 KCNJ11Q14654 390 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 NOMO1Q15155 1222 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 Q3C1V9 767 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 CFAP157Q5JU67 520 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 CDCA2Q69YH5 1023 aaPredicted RBP11.29□□□□□ -0.6
LRIF1-201ENST00000369763 PMF1Q6P1K2 205 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 CATSPERGQ6ZRH7 1159 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 CRLF3Q8IUI8 442 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 ENDOVQ8N8Q3 282 aaKnown RBP11.29□□□□□ -0.6
LRIF1-201ENST00000369763 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 PDGFCQ9NRA1 345 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 LNPEPQ9UIQ6 1025 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 PPM1HQ9ULR3 514 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 PCDHGC3Q9UN70 934 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 PLLPQ9Y342 182 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 A0A087WZ62 844 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 A6NHS1 94 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 USP12O75317 370 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SKIP12755 728 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 LCP1P13796 627 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 MSX2P35548 267 aaPredicted RBP11.29□□□□□ -0.6
LRIF1-201ENST00000369763 GOLGA7BQ2TAP0 167 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 FAM160B1Q5W0V3 765 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 ZPBP2Q6X784 338 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 NIPA2Q8N8Q9 360 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SH3TC2Q8TF17 1288 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 RNF157Q96PX1 679 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 LGMNQ99538 433 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 FDXACB1Q9BRP7 624 aaPredicted RBP11.29□□□□□ -0.6
LRIF1-201ENST00000369763 KLC2Q9H0B6 622 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 USP29Q9HBJ7 922 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 ARHGEF4Q9NR80 690 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 ETNK2Q9NVF9 386 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 DNAJC16Q9Y2G8 782 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 HES2Q9Y543 173 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SNX9Q9Y5X1 595 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 COL2A1P02458 1487 aaPredicted RBP11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SOWAHBA6NEL2 793 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 TXNDC9O14530 226 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 APOL1O14791 398 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 RFPL1O75677 317 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 RABGGTBP53611 331 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SLC18A1P54219 525 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 TCHHL1Q5QJ38 904 aaPredicted RBP11.29□□□□□ -0.6
LRIF1-201ENST00000369763 DEFB132Q7Z7B7 95 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SESTD1Q86VW0 696 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SCUBE1Q8IWY4 988 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 TNS4Q8IZW8 715 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SLC26A7Q8TE54 656 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 PANX3Q96QZ0 392 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SNRNP25Q9BV90 132 aaKnown RBP11.29□□□□□ -0.6
LRIF1-201ENST00000369763 UNKQ9C0B0 810 aaKnown RBP11.29□□□□□ -0.6
LRIF1-201ENST00000369763 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 TMEM134Q9H6X4 195 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 PLAC1Q9HBJ0 212 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 POPDC2Q9HBU9 364 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 KRT82Q9NSB4 513 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SCOCQ9UIL1 159 aa11.29□□□□□ -0.6
LRIF1-201ENST00000369763 SPECC1L-ADORA2AF8WAN1 911 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 TRAFD1O14545 582 aaPredicted RBP11.28□□□□□ -0.6
LRIF1-201ENST00000369763 PPEF2O14830 753 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 ADORA2BP29275 332 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 EFNA5P52803 228 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 CACNA2D1P54289 1103 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 TARBP2Q15633 366 aaKnown RBP11.28□□□□□ -0.6
LRIF1-201ENST00000369763 CCDC14Q49A88 953 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 PPP1R26Q5T8A7 1209 aaPredicted RBP11.28□□□□□ -0.6
LRIF1-201ENST00000369763 MTBPQ96DY7 904 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 ZBED3Q96IU2 234 aaPredicted RBP11.28□□□□□ -0.6
LRIF1-201ENST00000369763 NIFKQ9BYG3 293 aaKnown RBP11.28□□□□□ -0.6
LRIF1-201ENST00000369763 RNPEPQ9H4A4 650 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 HOXC10Q9NYD6 342 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 GGA3Q9NZ52 723 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 SLC7A8Q9UHI5 535 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 PSAT1Q9Y617 370 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 SLC15A5A6NIM6 579 aa11.28□□□□□ -0.6
LRIF1-201ENST00000369763 GOLGA8TH3BQL2 631 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms