RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 GP5P40197 560 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 GEMP55040 296 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 SOX10P56693 466 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 SV2CQ496J9 727 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 GRTP1Q5TC63 336 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 GORASP1Q9BQQ3 440 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 AGO4Q9HCK5 861 aaKnown RBP16.38■□□□□ 0.21
COL17A1-202ENST00000369733 DMAP1Q9NPF5 467 aaPredicted RBP16.38■□□□□ 0.21
COL17A1-202ENST00000369733 VTI1BQ9UEU0 232 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 RECQLP46063 649 aaPredicted RBP16.38■□□□□ 0.21
COL17A1-202ENST00000369733 DLG4P78352 724 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 NFIAQ12857 509 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 DPYSL3Q14195 570 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 DCAF4L1Q3SXM0 396 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 TAF2Q6P1X5 1199 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 KYAT3Q6YP21 454 aaKnown RBP16.38■□□□□ 0.21
COL17A1-202ENST00000369733 ACOT1Q86TX2 421 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 CYLDQ9NQC7 956 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 KIDINS220Q9ULH0 1771 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 ASTN1O14525 1302 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 EVPLLA8MZ36 301 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 HIST1H2AGP0C0S8 130 aaPredicted RBP16.38■□□□□ 0.21
COL17A1-202ENST00000369733 HIST1H2ADP20671 130 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 SLFN11Q7Z7L1 901 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 DHDDSQ86SQ9 333 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 HIST1H2AHQ96KK5 128 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 HIST1H2AJQ99878 128 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 H2AFJQ9BTM1 129 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 SEMA6AQ9H2E6 1030 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 HSD3B7Q9H2F3 369 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 LATS2Q9NRM7 1088 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 NMRK1Q9NWW6 199 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 GPRC5DQ9NZD1 345 aa16.38■□□□□ 0.21
COL17A1-202ENST00000369733 AAR2Q9Y312 384 aaKnown RBP16.38■□□□□ 0.21
COL17A1-202ENST00000369733 ZMYM2Q9UBW7 1377 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 DNM1LO00429 736 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 KRR1Q13601 381 aaKnown RBP16.37■□□□□ 0.21
COL17A1-202ENST00000369733 NEDD8Q15843 81 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 NR1H4Q96RI1 486 aaPredicted RBP16.37■□□□□ 0.21
COL17A1-202ENST00000369733 CROTQ9UKG9 612 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 KPNA4O00629 521 aaPredicted RBP16.37■□□□□ 0.21
COL17A1-202ENST00000369733 TRDMT1O14717 391 aaKnown RBP16.37■□□□□ 0.21
COL17A1-202ENST00000369733 CLOCKO15516 846 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 PGM3O95394 542 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 VANGL2Q9ULK5 521 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 SORCS3Q9UPU3 1222 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 SPATA31D1Q6ZQQ2 1576 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 EML1O00423 815 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 PTPN11Q06124 597 aaPredicted RBP16.37■□□□□ 0.21
COL17A1-202ENST00000369733 PPP3CAQ08209 521 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 CSHL1Q14406 222 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 GALNTL6Q49A17 601 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 RASGEF1CQ8N431 466 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 VGLL2Q8N8G2 317 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 WDR60Q8WVS4 1066 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 SLC10A4Q96EP9 437 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 TMEM176AQ96HP8 235 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 KCTD14Q9BQ13 255 aaPredicted RBP16.37■□□□□ 0.21
COL17A1-202ENST00000369733 ACP6Q9NPH0 428 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 SYBUQ9NX95 663 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 CLIC5Q9NZA1 410 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 SLC30A1Q9Y6M5 507 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 PGAM1P18669 254 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 RARRES1P49788 294 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 AMHR2Q16671 573 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 CENPLQ8N0S6 344 aaPredicted RBP16.37■□□□□ 0.21
COL17A1-202ENST00000369733 BHLHE22Q8NFJ8 381 aaPredicted RBP16.37■□□□□ 0.21
COL17A1-202ENST00000369733 MMTAG2Q9BU76 263 aaKnown RBP16.37■□□□□ 0.21
COL17A1-202ENST00000369733 COPG2Q9UBF2 871 aa16.37■□□□□ 0.21
COL17A1-202ENST00000369733 SMIM22K7EJ46 135 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 LIASO43766 372 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 MPZL3Q6UWV2 235 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 CYP2R1Q6VVX0 501 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 C3orf67Q6ZVT6 689 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 LRRC8DQ7L1W4 858 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 APOBEC3FQ8IUX4 373 aaKnown RBP16.36■□□□□ 0.21
COL17A1-202ENST00000369733 CROCCP3Q8IVE0 287 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 PURBQ96QR8 312 aaKnown RBP16.36■□□□□ 0.21
COL17A1-202ENST00000369733 RNF112Q9ULX5 631 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 SYNDIG1LA6NDD5 238 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 DCDC2CA8MYV0 355 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 C2CD2LO14523 706 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 MT-CO1P00395 513 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 RBP1P09455 135 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 CHRM3P20309 590 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 TCF7P36402 384 aaPredicted RBP16.36■□□□□ 0.21
COL17A1-202ENST00000369733 PKNOX1P55347 436 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 GLRA4Q5JXX5 417 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 EFHBQ8N7U6 833 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 ZNF280CQ8ND82 737 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 UNKQ9C0B0 810 aaKnown RBP16.36■□□□□ 0.21
COL17A1-202ENST00000369733 TRPC7Q9HCX4 862 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 DDIT4Q9NX09 232 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 ETFBP38117 255 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 KRT33BQ14525 404 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 C16orf46Q6P387 395 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 OTULINQ96BN8 352 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 SPATA17Q96L03 361 aa16.36■□□□□ 0.21
COL17A1-202ENST00000369733 A0A087WXM4 84 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms