RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 NTPCRQ9BSD7 190 aaKnown RBP12.74□□□□□ -0.37
PHGDH-201ENST00000369407 ANKEF1Q9NU02 776 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 IL1RAPL1Q9NZN1 696 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 PPME1Q9Y570 386 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
PHGDH-201ENST00000369407 KLF11O14901 512 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 ITGA2BP08514 1039 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 COPAP53621 1224 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 OSTNP61366 133 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 CRADDP78560 199 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 FAM91A1Q658Y4 838 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 STKLD1Q8NE28 680 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 ZNF668Q96K58 619 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 IFT122Q9HBG6 1241 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 CDH22Q9UJ99 828 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 POMPQ9Y244 141 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 SIN3BO75182 1162 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 CAPN15O75808 1086 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 ICAM1P05362 532 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 PMLP29590 882 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 CHN2P52757 468 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 CDH6P55285 790 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 HNRNPDQ14103 355 aaKnown RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 MAVSQ7Z434 540 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 PODNQ7Z5L7 613 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 SDCCAG8Q86SQ7 713 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 CCDC60Q8IWA6 550 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 RNF148Q8N7C7 305 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 MOCOSQ96EN8 888 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 DTNBP1Q96EV8 351 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 CNBD2Q96M20 576 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 TCHPQ9BT92 498 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 IMPG2Q9BZV3 1241 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 UBAP1Q9NZ09 502 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 TBC1D30Q9Y2I9 924 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 PCDHA10Q9Y5I2 948 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 HEMK1Q9Y5R4 338 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 VILLO15195 856 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 RAD17O75943 681 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 SMIM18P0DKX4 95 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 ADORA2AP29274 412 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 CDH8P55286 799 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 MAP7Q14244 749 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 HADHQ16836 314 aaKnown RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 ARHGEF16Q5VV41 709 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 UGT2A3Q6UWM9 527 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 KYAT3Q6YP21 454 aaKnown RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 FRMD7Q6ZUT3 714 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 ANKRD23Q86SG2 305 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 RBM12BQ8IXT5 1001 aaKnown RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 METTL25Q8N6Q8 603 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 PEBP4Q96S96 227 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 CPXM1Q96SM3 734 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 TMEM39BQ9GZU3 492 aa12.73□□□□□ -0.37
PHGDH-201ENST00000369407 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 APOBEC2Q9Y235 224 aaKnown RBP12.73□□□□□ -0.37
PHGDH-201ENST00000369407 A0A1B0GTW7 788 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 ADCY3O60266 1144 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 RBL1P28749 1068 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 CA8P35219 290 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 PTPN7P35236 360 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 PRKCEQ02156 737 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 TUBB3Q13509 450 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 NADK2Q4G0N4 442 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 ANGEL2Q5VTE6 544 aaKnown RBP12.72□□□□□ -0.37
PHGDH-201ENST00000369407 UNC5AQ6ZN44 842 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 TMC7Q7Z402 723 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 CAND1Q86VP6 1230 aaKnown RBP12.72□□□□□ -0.37
PHGDH-201ENST00000369407 CDR2LQ86X02 465 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-201ENST00000369407 TTC13Q8NBP0 860 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 ICA1LQ8NDH6 482 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 PGLYRP2Q96PD5 576 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 OXCT2Q9BYC2 517 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-201ENST00000369407 ZNF341Q9BYN7 854 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 POPDC2Q9HBU9 364 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 ARHGAP28Q9P2N2 729 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 CNTNAP2Q9UHC6 1331 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 APOC4-APOC2K7ER74 178 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 K7ERI5 159 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 MAGEB3O15480 346 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 DCXO43602 365 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 SNNO75324 88 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-201ENST00000369407 TRPA1O75762 1119 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 APOC2P02655 101 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 KRT7P08729 469 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 OSBPP22059 807 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 PAX3P23760 479 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 TBXAS1P24557 533 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-201ENST00000369407 ARRB2P32121 409 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 JAK3P52333 1124 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 MCCD1P59942 119 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-201ENST00000369407 CLDN10P78369 228 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 C15orf59Q2T9L4 293 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-201ENST00000369407 ANKRD20A4Q4UJ75 823 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 STRIP1Q5VSL9 837 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 NETO2Q8NC67 525 aa12.72□□□□□ -0.37
PHGDH-201ENST00000369407 CEP70Q8NHQ1 597 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms