RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SSX2IPQ9Y2D8 614 aa24.89■■□□□ 1.57
SNX3-203ENST00000368979 EFR3BQ9Y2G0 817 aa24.89■■□□□ 1.57
SNX3-203ENST00000368979 TARSL2A2RTX5 802 aaKnown RBP24.88■■□□□ 1.57
SNX3-203ENST00000368979 SEC24AO95486 1093 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 CD48P09326 243 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 KRT10P13645 584 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 PGFP49763 221 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 C9orf50Q5SZB4 431 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 CCDC70Q6NSX1 233 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 MON1AQ86VX9 555 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 FAM131BQ86XD5 332 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 CCDC185Q8N715 623 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 NMUR1Q9HB89 426 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 GPATCH2LQ9NWQ4 482 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 LZTS1Q9Y250 596 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 RWDD3Q9Y3V2 267 aa24.88■■□□□ 1.57
SNX3-203ENST00000368979 A0A1W2PQH9 124 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 LINC01553A4QN01 128 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 IGLV3-25P01717 112 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 YWHAQP27348 245 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 CTNNB1P35222 781 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 CDH6P55285 790 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 ADCY2Q08462 1091 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 PDK2Q15119 407 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 CA9Q16790 459 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 ZC3H12AQ5D1E8 599 aaKnown RBP24.87■■□□□ 1.57
SNX3-203ENST00000368979 BTBD8Q5XKL5 378 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 TAC4Q86UU9 113 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 VSIG1Q86XK7 387 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 ARHGAP18Q8N392 663 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 DQX1Q8TE96 717 aaKnown RBP24.87■■□□□ 1.57
SNX3-203ENST00000368979 TTLL2Q9BWV7 592 aa24.87■■□□□ 1.57
SNX3-203ENST00000368979 WDR6Q9NNW5 1121 aaKnown RBP24.87■■□□□ 1.57
SNX3-203ENST00000368979 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.87■■□□□ 1.57
SNX3-203ENST00000368979 SLC38A8A6NNN8 435 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 TEX28O15482 410 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 TJP3O95049 919 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 CHRNA3P32297 505 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 MAGEA10P43363 369 aaPredicted RBP24.86■■□□□ 1.57
SNX3-203ENST00000368979 NME3Q13232 169 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 MTMR3Q13615 1198 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 DPYSL3Q14195 570 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 DPYSL2Q16555 572 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 PSTKQ8IV42 348 aaKnown RBP24.86■■□□□ 1.57
SNX3-203ENST00000368979 ADAM32Q8TC27 787 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 ANKRD7Q92527 254 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 PNKPQ96T60 521 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 PARD6BQ9BYG5 372 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 LRRC19Q9H756 370 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 PCDH18Q9HCL0 1135 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 OSER1Q9NX31 292 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 GMIPQ9P107 970 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 FZD10Q9ULW2 581 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 MAFFQ9ULX9 164 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 AP4E1Q9UPM8 1137 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 SYNJ2BP-COX16A0A087WUM0 186 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 RAD51CO43502 376 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 F9P00740 461 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 EIF4EBP2Q13542 120 aaPredicted RBP24.86■■□□□ 1.57
SNX3-203ENST00000368979 KAZNQ674X7 775 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 GIPC2Q8TF65 315 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 HDAC7Q8WUI4 952 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 FBXO32Q969P5 355 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 NTAN1Q96AB6 310 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 SMOC2Q9H3U7 446 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 FAM204AQ9H8W3 233 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 DDIT4Q9NX09 232 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 COX16Q9P0S2 106 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 YIPF1Q9Y548 306 aa24.86■■□□□ 1.57
SNX3-203ENST00000368979 ZNF487B1APH4 448 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 AIF1P55008 147 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 MRPS25P82663 173 aaKnown RBP24.85■■□□□ 1.57
SNX3-203ENST00000368979 KRT81Q14533 505 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 TTC27Q6P3X3 843 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 MAP7D3Q8IWC1 876 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 MAGOHBQ96A72 148 aaKnown RBP24.85■■□□□ 1.57
SNX3-203ENST00000368979 CALN1Q9BXU9 219 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 CYP4F11Q9HBI6 524 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 MTMR10Q9NXD2 777 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 AMACRQ9UHK6 382 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 DMGDHQ9UI17 866 aaKnown RBP24.85■■□□□ 1.57
SNX3-203ENST00000368979 RAB21Q9UL25 225 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 R3HDM2Q9Y2K5 976 aaKnown RBP24.85■■□□□ 1.57
SNX3-203ENST00000368979 NR2E3Q9Y5X4 410 aa24.85■■□□□ 1.57
SNX3-203ENST00000368979 C5orf67F2Z3F1 127 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 CNPP09543 421 aaKnown RBP24.84■■□□□ 1.57
SNX3-203ENST00000368979 L1CAMP32004 1257 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 FNTAP49354 379 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 TAF10Q12962 218 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 MSANTD2Q6P1R3 559 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 BBS12Q6ZW61 710 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 CCDC26Q8TAB7 109 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 C1orf54Q8WWF1 131 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 RUBCNQ92622 972 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 ZNF670Q9BS34 389 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 C17orf80Q9BSJ5 609 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 DCLK3Q9C098 648 aa24.84■■□□□ 1.57
SNX3-203ENST00000368979 ZNF638Q14966 1978 aaKnown RBP24.84■■□□□ 1.57
SNX3-203ENST00000368979 IRAK2O43187 625 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 ARHGEF15O94989 841 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms