RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 C16orf59Q7L2K0 433 aa18.46■□□□□ 0.55
SNX27-203ENST00000368843 ANKS1AQ92625 1134 aa18.46■□□□□ 0.55
SNX27-203ENST00000368843 RTFDC1Q9BY42 306 aaPredicted RBP18.46■□□□□ 0.55
SNX27-203ENST00000368843 ISCUQ9H1K1 167 aa18.46■□□□□ 0.55
SNX27-203ENST00000368843 TRPC4Q9UBN4 977 aa18.46■□□□□ 0.55
SNX27-203ENST00000368843 TOMM70O94826 608 aa18.46■□□□□ 0.55
SNX27-203ENST00000368843 HIRAP54198 1017 aaPredicted RBP18.46■□□□□ 0.55
SNX27-203ENST00000368843 TBX4P57082 545 aa18.46■□□□□ 0.55
SNX27-203ENST00000368843 ADIGQ0VDE8 80 aa18.46■□□□□ 0.55
SNX27-203ENST00000368843 KCNB2Q92953 911 aa18.46■□□□□ 0.55
SNX27-203ENST00000368843 MIEF1Q9NQG6 463 aa18.46■□□□□ 0.55
SNX27-203ENST00000368843 HPS5Q9UPZ3 1129 aa18.46■□□□□ 0.55
SNX27-203ENST00000368843 FYNP06241 537 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 PSMA4P25789 261 aaKnown RBP18.45■□□□□ 0.54
SNX27-203ENST00000368843 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNX27-203ENST00000368843 LRRC40Q9H9A6 602 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 NCKAP1Q9Y2A7 1128 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 RIMS1Q86UR5 1692 aaKnown RBP18.45■□□□□ 0.54
SNX27-203ENST00000368843 WLSQ5T9L3 541 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 GMCL1Q96IK5 515 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 NSL1Q96IY1 281 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 ZIM3Q96PE6 472 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 SYT15Q9BQS2 421 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 GEMIN8Q9NWZ8 242 aaKnown RBP18.45■□□□□ 0.54
SNX27-203ENST00000368843 DRG1Q9Y295 367 aaKnown RBP18.45■□□□□ 0.54
SNX27-203ENST00000368843 CYP2F1P24903 491 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 PREPLQ4J6C6 727 aaPredicted RBP18.45■□□□□ 0.54
SNX27-203ENST00000368843 CCDC126Q96EE4 140 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 GTF3C4Q9UKN8 822 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 NR5A2O00482 541 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 FDPSP14324 419 aaKnown RBP18.45■□□□□ 0.54
SNX27-203ENST00000368843 OR1E1P30953 314 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 CYP4Z1Q86W10 505 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 EMC1Q8N766 993 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNX27-203ENST00000368843 RXFP2Q8WXD0 754 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 SPACA7Q96KW9 195 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 KCNF1Q9H3M0 494 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 ABCB1P08183 1280 aaPredicted RBP18.45■□□□□ 0.54
SNX27-203ENST00000368843 KCNA3P22001 575 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 RAB27AP51159 221 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 CAPRIN2Q6IMN6 1127 aaKnown RBP18.45■□□□□ 0.54
SNX27-203ENST00000368843 CAAP1Q9H8G2 361 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 SPG21Q9NZD8 308 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 CCNT2O60583 730 aaKnown RBP18.45■□□□□ 0.54
SNX27-203ENST00000368843 ATP6V1B1P15313 513 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 CCR1P32246 355 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 TRPM8Q7Z2W7 1104 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 ACOX2Q99424 681 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 TMEM121Q9BTD3 319 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 FBXO44Q9H4M3 255 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 FZD1Q9UP38 647 aa18.45■□□□□ 0.54
SNX27-203ENST00000368843 NFICP08651 508 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 TARSP26639 723 aaKnown RBP18.44■□□□□ 0.54
SNX27-203ENST00000368843 COPAP53621 1224 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 CXCL9Q07325 125 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 DYNC1I2Q13409 638 aaKnown RBP18.44■□□□□ 0.54
SNX27-203ENST00000368843 CSHL1Q14406 222 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 ARID3BQ8IVW6 561 aaPredicted RBP18.44■□□□□ 0.54
SNX27-203ENST00000368843 SLC20A1Q8WUM9 679 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 FRMD8Q9BZ67 464 aaPredicted RBP18.44■□□□□ 0.54
SNX27-203ENST00000368843 HMX1Q9NP08 348 aaPredicted RBP18.44■□□□□ 0.54
SNX27-203ENST00000368843 TBC1D13Q9NVG8 400 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 TMCC3Q9ULS5 477 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 A8MX80 341 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 DSG3P32926 999 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 C11orf63Q6NUN7 778 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 NLNQ9BYT8 704 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 TIMM44O43615 452 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 ELAVL2Q12926 359 aaKnown RBP18.44■□□□□ 0.54
SNX27-203ENST00000368843 DAB2IPQ5VWQ8 1189 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 SLC30A10Q6XR72 485 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 COLGALT1Q8NBJ5 622 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 YWHAQP27348 245 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 DNAJC3Q13217 504 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 USP39Q53GS9 565 aaKnown RBP18.44■□□□□ 0.54
SNX27-203ENST00000368843 SYTL5Q8TDW5 730 aaPredicted RBP18.44■□□□□ 0.54
SNX27-203ENST00000368843 COPG1Q9Y678 874 aaKnown RBP18.44■□□□□ 0.54
SNX27-203ENST00000368843 PRKAA1Q13131 559 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 SOCS4Q8WXH5 440 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 CEP41Q9BYV8 373 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 WDR41Q9HAD4 459 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 TAF6LQ9Y6J9 622 aa18.44■□□□□ 0.54
SNX27-203ENST00000368843 ERI2A8K979 691 aaKnown RBP18.43■□□□□ 0.54
SNX27-203ENST00000368843 PDZK1P1A8MUH7 402 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 ERMARDQ5T6L9 678 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 SNRNP27Q8WVK2 155 aaKnown RBP18.43■□□□□ 0.54
SNX27-203ENST00000368843 BBS2Q9BXC9 721 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 UTP6Q9NYH9 597 aaKnown RBP18.43■□□□□ 0.54
SNX27-203ENST00000368843 DLC1Q96QB1 1528 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 KATNA1O75449 491 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 ZNF682O95780 498 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 GJC2Q5T442 439 aaPredicted RBP18.43■□□□□ 0.54
SNX27-203ENST00000368843 XYLBO75191 536 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 AKR1A1P14550 325 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 POU1F1P28069 291 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 NFE2Q16621 373 aaPredicted RBP18.43■□□□□ 0.54
SNX27-203ENST00000368843 CBWD3Q5JTY5 395 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 CBWD5Q5RIA9 395 aa18.43■□□□□ 0.54
SNX27-203ENST00000368843 GPAMQ9HCL2 828 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms