RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 MAMLD1Q13495 774 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 RAB33AQ14088 237 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 RPS6KA1Q15418 735 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 SLC5A9Q2M3M2 681 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 PABPC1LQ4VXU2 614 aaKnown RBP9.23□□□□□ -0.93
SNX27-201ENST00000368838 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 RSRC2Q7L4I2 434 aaKnown RBP9.23□□□□□ -0.93
SNX27-201ENST00000368838 NPAS3Q8IXF0 933 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 ANKRD52Q8NB46 1076 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 ZNF564Q8TBZ8 553 aaPredicted RBP9.23□□□□□ -0.93
SNX27-201ENST00000368838 KCTD13Q8WZ19 329 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 ZNF592Q92610 1267 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 ARHGEF26Q96DR7 871 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 SUSD3Q96L08 255 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 TWNKQ96RR1 684 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 OSBPL9Q96SU4 736 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 ACBD6Q9BR61 282 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 RHOBTB2Q9BYZ6 727 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 PLA2G2FQ9BZM2 168 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 PDCL3Q9H2J4 239 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 PNPLA8Q9NP80 782 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 ACP6Q9NPH0 428 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 CTTNBP2NLQ9P2B4 639 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 MTRRQ9UBK8 725 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 CNOT8Q9UFF9 292 aaKnown RBP9.23□□□□□ -0.93
SNX27-201ENST00000368838 TMEM59LQ9UK28 342 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 AMFRQ9UKV5 643 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 L1RE1Q9UN81 338 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 SIT1Q9Y3P8 196 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 MTF2Q9Y483 593 aaPredicted RBP9.23□□□□□ -0.93
SNX27-201ENST00000368838 ALG6Q9Y672 507 aa9.23□□□□□ -0.93
SNX27-201ENST00000368838 CEP250Q9BV73 2442 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 WDR27A2RRH5 827 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 MYO1FO00160 1098 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 NRG2O14511 850 aaPredicted RBP9.22□□□□□ -0.93
SNX27-201ENST00000368838 PPEF2O14830 753 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 SYN3O14994 580 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 BUB1O43683 1085 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 XYLBO75191 536 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 TADA3O75528 432 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 PROSCO94903 275 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 OAZ2O95190 189 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 PAPLNO95428 1278 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 SEC24AO95486 1093 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 HNRNPA1P09651 372 aaKnown RBP eCLIP9.22□□□□□ -0.93
SNX27-201ENST00000368838 CEBPBP17676 345 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 CD58P19256 250 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 RRM1P23921 792 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 BRD2P25440 801 aaKnown RBP9.22□□□□□ -0.93
SNX27-201ENST00000368838 PCSK1P29120 753 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 CTNNA1P35221 906 aaKnown RBP9.22□□□□□ -0.93
SNX27-201ENST00000368838 GNL1P36915 607 aaPredicted RBP9.22□□□□□ -0.93
SNX27-201ENST00000368838 ACADSBP45954 432 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 NOP2P46087 812 aaKnown RBP9.22□□□□□ -0.93
SNX27-201ENST00000368838 PLA2G4AP47712 749 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 PEX5P50542 639 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 GUCY2FP51841 1108 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 CDH8P55286 799 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 SMARCB1Q12824 385 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 PIGHQ14442 188 aaPredicted RBP9.22□□□□□ -0.93
SNX27-201ENST00000368838 UBXN2BQ14CS0 331 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 MAPRE1Q15691 268 aaKnown RBP9.22□□□□□ -0.93
SNX27-201ENST00000368838 CFAP221Q4G0U5 840 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 VARS2Q5ST30 1063 aaKnown RBP9.22□□□□□ -0.93
SNX27-201ENST00000368838 TAF3Q5VWG9 929 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 NAA35Q5VZE5 725 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 FAM171BQ6P995 826 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 BEND5Q7L4P6 421 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 PEX26Q7Z412 305 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 ERICH1Q86X53 443 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 VSIG1Q86XK7 387 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 ADGRF2Q8IZF7 708 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 PDCL2Q8N4E4 241 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 ZNF653Q96CK0 615 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 C18orf8Q96DM3 657 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 SENP8Q96LD8 212 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 CEP295NLQ96MC4 621 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 MMS19Q96T76 1030 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 MRPL45Q9BRJ2 306 aaKnown RBP9.22□□□□□ -0.93
SNX27-201ENST00000368838 OSGEPQ9NPF4 335 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 SLC2A4RGQ9NR83 387 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 ASNSD1Q9NWL6 643 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 IP6K2Q9UHH9 426 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 RABGEF1Q9UJ41 708 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 CDH9Q9ULB4 789 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 TFR2Q9UP52 801 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 MRPS23Q9Y3D9 190 aaKnown RBP9.22□□□□□ -0.93
SNX27-201ENST00000368838 NME7Q9Y5B8 376 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 PCDHA3Q9Y5H8 950 aa9.22□□□□□ -0.93
SNX27-201ENST00000368838 MYH10P35580 1976 aa9.21□□□□□ -0.93
SNX27-201ENST00000368838 CTAGE15A4D2H0 777 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 A8MXQ7 604 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 CCDC188H7C350 402 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 CYB561D2O14569 222 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 PRRG1O14668 218 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 DDX3YO15523 660 aaKnown RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 TRAPPC3O43617 180 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 MICAL2O94851 1124 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 RHOP08100 348 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 GLI1P08151 1106 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms