RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 UNC93AQ86WB7 457 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 NUP93Q8N1F7 819 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 TRMT13Q9NUP7 481 aaKnown RBP11.09□□□□□ -0.63
PTPRK-205ENST00000368213 MYL2P10916 166 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 AARSP49588 968 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTPRK-205ENST00000368213 NPAS4Q8IUM7 802 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 ZNF606Q8WXB4 792 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 MS4A14Q96JA4 679 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 PPP1R36Q96LQ0 422 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 CCDC138Q96M89 665 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 NLNQ9BYT8 704 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 TXLNGQ9NUQ3 528 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 NMRK1Q9NWW6 199 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 INTUQ9ULD6 942 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 RRM1P23921 792 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 CYP2F1P24903 491 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 ACLYP53396 1101 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 SLC12A3P55017 1021 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 KRT72Q14CN4 511 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 CCL14Q16627 93 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 PPIL6Q8IXY8 311 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 C18orf25Q96B23 403 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-205ENST00000368213 TRIM51Q9BSJ1 452 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 RUBCNLQ9H714 662 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 SMYD3Q9H7B4 428 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 TBL1XO60907 577 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 SERPINA4P29622 427 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 CYP2C18P33260 490 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 BRCC3P46736 316 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 TGM3Q08188 693 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 PTK7Q13308 1070 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 TARBP2Q15633 366 aaKnown RBP11.09□□□□□ -0.63
PTPRK-205ENST00000368213 RASAL3Q86YV0 1011 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 MAB21L3Q8N8X9 362 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 TKTL2Q9H0I9 626 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 SPAG6O75602 509 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 APODP05090 189 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 DARSP14868 501 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 HDAC4P56524 1084 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 FOXR1Q6PIV2 292 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 SCLYQ96I15 445 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 KCNMB3Q9NPA1 279 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 PCMTD2Q9NV79 361 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 SMARCAL1Q9NZC9 954 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 KIF17Q9P2E2 1029 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 LTBP3Q9NS15 1303 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 OPHN1O60890 802 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 ITGB5P18084 799 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 TFDP3Q5H9I0 405 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 C6orf10Q5SRN2 563 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 RARS2Q5T160 578 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 SDHAF4Q5VUM1 108 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 LENG9Q96B70 501 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 APOL2Q9BQE5 337 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 FRMD8P1Q9BZ68 369 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 TDRKHQ9Y2W6 561 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 UNCXA6NJT0 531 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 IL1BP01584 269 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 NPR3P17342 541 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 GRM5P41594 1212 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 RFX3P48380 749 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 SMAD3P84022 425 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 IFT88Q13099 833 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 ZNF268Q14587 947 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 CASP8Q14790 479 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 FAM133BQ5BKY9 247 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 EARS2Q5JPH6 523 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 TSHZ1Q6ZSZ6 1077 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 GSPT2Q8IYD1 628 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 KIRREL3Q8IZU9 778 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 LZTR1Q8N653 840 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 TMEM159Q96B96 161 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 PRPF18Q99633 342 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 NXF3Q9H4D5 531 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 ECT2Q9H8V3 914 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 NDRG2Q9UN36 371 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 FAM47E-STBD1D6RA91 191 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 B4GALT5O43286 388 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 ABCE1P61221 599 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 SLC6A3Q01959 620 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 GPM6BQ13491 265 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 NFIL3Q16649 462 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 ARMC12Q5T9G4 340 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 FAM124AQ86V42 546 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 PAWRQ96IZ0 340 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 KCTD10Q9H3F6 313 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 WDR41Q9HAD4 459 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 RNF112Q9ULX5 631 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 SNX12Q9UMY4 172 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 ARHGAP26Q9UNA1 814 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 RPS6KL1Q9Y6S9 549 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 ABCC6O95255 1503 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 PTPN7P35236 360 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 XRCC4Q13426 336 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 MAPRE2Q15555 327 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 DDR2Q16832 855 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 FAM46CQ5VWP2 391 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 RAP1GAP2Q684P5 730 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 USP45Q70EL2 814 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms