RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 TBXAS1P24557 533 aaPredicted RBP12□□□□□ -0.49
USF1-201ENST00000368019 VHLP40337 213 aa12□□□□□ -0.49
USF1-201ENST00000368019 SLC26A2P50443 739 aa12□□□□□ -0.49
USF1-201ENST00000368019 GEMIN4P57678 1058 aaKnown RBP12□□□□□ -0.49
USF1-201ENST00000368019 KLC1Q07866 573 aa12□□□□□ -0.49
USF1-201ENST00000368019 NFX1Q12986 1120 aaKnown RBP12□□□□□ -0.49
USF1-201ENST00000368019 DNAJC3Q13217 504 aa12□□□□□ -0.49
USF1-201ENST00000368019 SMAD4Q13485 552 aaKnown RBP12□□□□□ -0.49
USF1-201ENST00000368019 PSMD6Q15008 389 aa12□□□□□ -0.49
USF1-201ENST00000368019 WDR44Q5JSH3 913 aa12□□□□□ -0.49
USF1-201ENST00000368019 RNASEH2BQ5TBB1 312 aaKnown RBP12□□□□□ -0.49
USF1-201ENST00000368019 ANO7Q6IWH7 933 aa12□□□□□ -0.49
USF1-201ENST00000368019 ADGRD1Q6QNK2 874 aa12□□□□□ -0.49
USF1-201ENST00000368019 ABHD15Q6UXT9 468 aa12□□□□□ -0.49
USF1-201ENST00000368019 C4orf50Q6ZRC1 276 aa12□□□□□ -0.49
USF1-201ENST00000368019 FAM47EQ6ZV65 393 aa12□□□□□ -0.49
USF1-201ENST00000368019 ADGRD2Q7Z7M1 963 aa12□□□□□ -0.49
USF1-201ENST00000368019 LONP2Q86WA8 852 aa12□□□□□ -0.49
USF1-201ENST00000368019 MFN1Q8IWA4 741 aa12□□□□□ -0.49
USF1-201ENST00000368019 KIAA0319LQ8IZA0 1049 aa12□□□□□ -0.49
USF1-201ENST00000368019 ARHGAP24Q8N264 748 aa12□□□□□ -0.49
USF1-201ENST00000368019 NIPA2Q8N8Q9 360 aa12□□□□□ -0.49
USF1-201ENST00000368019 ATP11CQ8NB49 1132 aa12□□□□□ -0.49
USF1-201ENST00000368019 KLHL23Q8NBE8 558 aa12□□□□□ -0.49
USF1-201ENST00000368019 TTC13Q8NBP0 860 aa12□□□□□ -0.49
USF1-201ENST00000368019 ZNF483Q8TF39 744 aaPredicted RBP12□□□□□ -0.49
USF1-201ENST00000368019 ZNF75CPQ92670 426 aaPredicted RBP12□□□□□ -0.49
USF1-201ENST00000368019 TRAPPC9Q96Q05 1148 aa12□□□□□ -0.49
USF1-201ENST00000368019 CDHR5Q9HBB8 845 aa12□□□□□ -0.49
USF1-201ENST00000368019 MLXIPLQ9NP71 852 aa12□□□□□ -0.49
USF1-201ENST00000368019 PARVAQ9NVD7 372 aa12□□□□□ -0.49
USF1-201ENST00000368019 CLEC1BQ9P126 229 aa12□□□□□ -0.49
USF1-201ENST00000368019 CD207Q9UJ71 328 aa12□□□□□ -0.49
USF1-201ENST00000368019 MTO1Q9Y2Z2 717 aaKnown RBP12□□□□□ -0.49
USF1-201ENST00000368019 DYNC1LI1Q9Y6G9 523 aaKnown RBP12□□□□□ -0.49
USF1-201ENST00000368019 WDR64B1ANS9 1081 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 ZBTB42B2RXF5 422 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 TISP43B9A030 160 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 M0QZ92 97 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 KLF11O14901 512 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 SLC16A4O15374 487 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 EXTL3O43909 919 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 HBP1O60381 514 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 MGEA5O60502 916 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 SPAG6O75602 509 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 CALB1P05937 261 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 LINGO3P0C6S8 592 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 KRT5P13647 590 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 KRT15P19012 456 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 ATP4AP20648 1035 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 TARSP26639 723 aaKnown RBP11.99□□□□□ -0.49
USF1-201ENST00000368019 GATMP50440 423 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 CCNHP51946 323 aaPredicted RBP11.99□□□□□ -0.49
USF1-201ENST00000368019 VCPP55072 806 aaKnown RBP11.99□□□□□ -0.49
USF1-201ENST00000368019 PEX3P56589 373 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 TAS2R40P59535 323 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 MAMLD1Q13495 774 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 OASLQ15646 514 aaKnown RBP11.99□□□□□ -0.49
USF1-201ENST00000368019 GSTA3Q16772 222 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 ZACNQ401N2 412 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 OTOAQ7RTW8 1153 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 POLNQ7Z5Q5 900 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 EFHBQ8N7U6 833 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.99□□□□□ -0.49
USF1-201ENST00000368019 MCPH1Q8NEM0 835 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 DNAJC9Q8WXX5 260 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 SLITRK1Q96PX8 696 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 ZNF518BQ9C0D4 1074 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 IGFLR1Q9H665 355 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 ACSS3Q9H6R3 686 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 KMT5AQ9NQR1 393 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 DNAJB4Q9UDY4 337 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 TBK1Q9UHD2 729 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 TCEAL9Q9UHQ7 104 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 HAO1Q9UJM8 370 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 TRIM33Q9UPN9 1127 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 FARP1Q9Y4F1 1045 aaPredicted RBP11.99□□□□□ -0.49
USF1-201ENST00000368019 ASB3Q9Y575 518 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 STYXL1Q9Y6J8 313 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 COL1A2P08123 1366 aa11.99□□□□□ -0.49
USF1-201ENST00000368019 NVLO15381 856 aaKnown RBP11.98□□□□□ -0.49
USF1-201ENST00000368019 HAUS5O94927 633 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 LSM8O95777 96 aaKnown RBP11.98□□□□□ -0.49
USF1-201ENST00000368019 GLP2RO95838 553 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 PIGRP01833 764 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 C4BPAP04003 597 aaKnown RBP11.98□□□□□ -0.49
USF1-201ENST00000368019 DHRS4L1P0CG22 281 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 SKIP12755 728 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 ACO1P21399 889 aaKnown RBP11.98□□□□□ -0.49
USF1-201ENST00000368019 PCK1P35558 622 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 NPTX2P47972 431 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 ARL4CP56559 192 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 PIGHQ14442 188 aaPredicted RBP11.98□□□□□ -0.49
USF1-201ENST00000368019 TRIP13Q15645 432 aaPredicted RBP11.98□□□□□ -0.49
USF1-201ENST00000368019 SLC1A5Q15758 541 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 PAN2Q504Q3 1202 aaKnown RBP11.98□□□□□ -0.49
USF1-201ENST00000368019 SLC39A4Q6P5W5 647 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 LVRNQ6Q4G3 990 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 GSTA5Q7RTV2 222 aa11.98□□□□□ -0.49
USF1-201ENST00000368019 CLNKQ7Z7G1 428 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms