RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 DPYSL3Q14195 570 aa7.54□□□□□ -1.2
VTA1-202ENST00000367630 WDR72Q3MJ13 1102 aa7.54□□□□□ -1.2
VTA1-202ENST00000367630 SH3D19Q5HYK7 790 aa7.54□□□□□ -1.2
VTA1-202ENST00000367630 TIFABQ6ZNK6 161 aa7.54□□□□□ -1.2
VTA1-202ENST00000367630 FAM47EQ6ZV65 393 aa7.54□□□□□ -1.2
VTA1-202ENST00000367630 ATPAF2Q8N5M1 289 aa7.54□□□□□ -1.2
VTA1-202ENST00000367630 DHX35Q9H5Z1 703 aaKnown RBP7.54□□□□□ -1.2
VTA1-202ENST00000367630 CACYBPQ9HB71 228 aaKnown RBP7.54□□□□□ -1.2
VTA1-202ENST00000367630 PKD2L2Q9NZM6 624 aa7.54□□□□□ -1.2
VTA1-202ENST00000367630 SEPT10Q9P0V9 454 aa7.54□□□□□ -1.2
VTA1-202ENST00000367630 DNPEPQ9ULA0 475 aa7.54□□□□□ -1.2
VTA1-202ENST00000367630 LRRC37AA6NMS7 1700 aa7.54□□□□□ -1.2
VTA1-202ENST00000367630 THSD7AQ9UPZ6 1657 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 TRIM49D1C9J1S8 452 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 EPHB6O15197 1021 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 TMCC1O94876 653 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 C4BPAP04003 597 aaKnown RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 FAM200BP0CF97 657 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 TXNP10599 105 aaKnown RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 TCF7P36402 384 aaPredicted RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 PIK3CGP48736 1102 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 LAMTOR4Q0VGL1 99 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 DDX42Q86XP3 938 aaKnown RBP eCLIP7.53□□□□□ -1.2
VTA1-202ENST00000367630 PDCD6IPQ8WUM4 868 aaKnown RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 NCLNQ969V3 563 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 AGBL1Q96MI9 1066 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 GPR101Q96P66 508 aaPredicted RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 TMEM120AQ9BXJ8 343 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 SYTL2Q9HCH5 934 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 NOD1Q9Y239 953 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 L3MBTL1Q9Y468 752 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 BTAF1O14981 1849 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 A0A0A0MRY4 1105 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 TXNDC9O14530 226 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 HCAR3P49019 387 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 CLDN10P78369 228 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 CDH17Q12864 832 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 TOP3AQ13472 1001 aaPredicted RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 CYLC2Q14093 348 aaPredicted RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 NOMO1Q15155 1222 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 ATP6V0D2Q8N8Y2 350 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 GPRC5AQ8NFJ5 357 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 LENG9Q96B70 501 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 FAM149B1Q96BN6 582 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 SPATA13Q96N96 652 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 RBBP8Q99708 897 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 EPS8L2Q9H6S3 715 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 NPHS2Q9NP85 383 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 CHST12Q9NRB3 414 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 COMMD3-BMI1R4GMX3 469 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 GCATO75600 419 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 PROZP22891 400 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 MAPK9P45984 424 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 TAF2Q6P1X5 1199 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 SLC27A1Q6PCB7 646 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 ACO2Q99798 780 aaKnown RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 ADARB2Q9NS39 739 aaKnown RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 H7C4K7 107 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 PPP1R11O60927 126 aaPredicted RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 NFIAQ12857 509 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 BNIP2Q12982 314 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 IQSEC1Q6DN90 963 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 LRRC8EQ6NSJ5 796 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 NEK10Q6ZWH5 1172 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 OR2W6PQ8NHA6 318 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 DNAJB8Q8NHS0 232 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 WDR60Q8WVS4 1066 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 SLC44A1Q8WWI5 657 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 PRCCQ92733 491 aaPredicted RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 CD101Q93033 1021 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 ARHGEF3Q9NR81 526 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 GRHL1Q9NZI5 618 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 SAC3D1A6NKF1 404 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 H3BNX3 289 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 DIAPH2O60879 1101 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 ITGA4P13612 1032 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 KCNA3P22001 575 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 PSEN1P49768 467 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 CCNG1P51959 295 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 SATB1Q01826 763 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 ELAVL2Q12926 359 aaKnown RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 ARHGAP17Q68EM7 881 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 GJB7Q6PEY0 223 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 LCLAT1Q6UWP7 414 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 BNC2Q6ZN30 1099 aaPredicted RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 MICALL2Q8IY33 904 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 RP9Q8TA86 221 aaKnown RBP7.53□□□□□ -1.2
VTA1-202ENST00000367630 TXLNGYQ9BZA5 131 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 ENTPD7Q9NQZ7 604 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 RAD18Q9NS91 495 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 APPL1Q9UKG1 709 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 SUFUQ9UMX1 484 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 SQORQ9Y6N5 450 aa7.53□□□□□ -1.2
VTA1-202ENST00000367630 C7orf43Q8WVR3 580 aa7.52□□□□□ -1.2
VTA1-202ENST00000367630 PRMT6Q96LA8 375 aaPredicted RBP7.52□□□□□ -1.2
VTA1-202ENST00000367630 TRIM45Q9H8W5 580 aaPredicted RBP7.52□□□□□ -1.2
VTA1-202ENST00000367630 SNTG2Q9NY99 539 aa7.52□□□□□ -1.2
VTA1-202ENST00000367630 NCKIPSDQ9NZQ3 722 aa7.52□□□□□ -1.2
VTA1-202ENST00000367630 TNFAIP8O95379 198 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 NCF2P19878 526 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms