RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 NT5DC3Q86UY8 548 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 STK39Q9UEW8 545 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 SERPINB5P36952 375 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 TFDP3Q5H9I0 405 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 ARID3BQ8IVW6 561 aaPredicted RBP16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 FBXO36Q8NEA4 188 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 VPS33AQ96AX1 596 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 TMEM176AQ96HP8 235 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 EFCAB1Q9HAE3 211 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 LRRC14BA6NHZ5 514 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 KRT6AP02538 564 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 KRT6BP04259 564 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 CSF1RP07333 972 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 NOS3P29474 1203 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 CCR1P32246 355 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 KRT6CP48668 564 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 TGFB2P61812 414 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 FAM111AQ96PZ2 611 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 DDX43Q9NXZ2 648 aaKnown RBP16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 SLCO1B7G3V0H7 640 aa16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 OR56A5P0C7T3 313 aa16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 ZNF24P17028 368 aa16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 KLC1Q07866 573 aa16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 NR1I3Q14994 352 aa16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 OVOS1Q6IE37 1185 aa16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 CBWD2Q8IUF1 395 aa16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 ZNF655Q8N720 491 aaPredicted RBP16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 CCT8L2Q96SF2 557 aa16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 POLG2Q9UHN1 485 aa16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 RAB23Q9ULC3 237 aa16.14■□□□□ 0.18
NUCKS1-201ENST00000367142 H3BMM5 538 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 TBX4P57082 545 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 NEK10Q6ZWH5 1172 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 SEC16BQ96JE7 1060 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 GPRC5DQ9NZD1 345 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 CCNT2O60583 730 aaKnown RBP16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 KRR1Q13601 381 aaKnown RBP16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 OR2W6PQ8NHA6 318 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 FAM120BQ96EK7 910 aaKnown RBP16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 ACOX2Q99424 681 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 THAP2Q9H0W7 228 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 SPTLC1O15269 473 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 NDUFS2O75306 463 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 RTN3O95197 1032 aaPredicted RBP16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 SGPL1O95470 568 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 CCND1P24385 295 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 PCNX4Q63HM2 1172 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 STRA8Q7Z7C7 330 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 CELF4Q9BZC1 486 aaKnown RBP16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 SLC24A3Q9HC58 644 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 GPATCH2LQ9NWQ4 482 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 LSM8O95777 96 aaKnown RBP16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 TPBGLP0DKB5 382 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 TALDO1P37837 337 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 KCNJ1P48048 391 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 C1DQ13901 141 aaKnown RBP16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 FBXO47Q5MNV8 452 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 CCNI2Q6ZMN8 369 aaPredicted RBP16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 DNAJC9Q8WXX5 260 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 SYT15Q9BQS2 421 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 RRN3Q9NYV6 651 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 ATP6V1HQ9UI12 483 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 MBD5Q9P267 1494 aa16.14■□□□□ 0.17
NUCKS1-201ENST00000367142 NR5A2O00482 541 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 ZNF609O15014 1411 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 PABPC1P11940 636 aaKnown RBP16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 NME5P56597 212 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 SEL1L3Q68CR1 1132 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 MACC1Q6ZN28 852 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 ZNF786Q8N393 782 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 SOCS4Q8WXH5 440 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 ARHGEF3Q9NR81 526 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 MSRAQ9UJ68 235 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 CRYL1Q9Y2S2 319 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 CNOT3O75175 753 aaKnown RBP16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 ZNF286BP0CG31 522 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 DSG3P32926 999 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 PEX5P50542 639 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 CBWD3Q5JTY5 395 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 CBWD5Q5RIA9 395 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 C11orf88Q6PI97 169 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 MOXD1Q6UVY6 613 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 ILDR2Q71H61 639 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 LRRC6Q86X45 466 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 SH2D3CQ8N5H7 860 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 ZNF557Q8N988 423 aaPredicted RBP16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 CYP4F12Q9HCS2 524 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 AVENQ9NQS1 362 aaPredicted RBP16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 PXMP2Q9NR77 195 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 KDM6BO15054 1643 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 RGL2O15211 777 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 TM9SF1O15321 606 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 DLGAP3O95886 979 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 CCDC103Q8IW40 242 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 DNERQ8NFT8 737 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 PPP1R16AQ96I34 528 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 GALNT8Q9NY28 637 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 PRDM15P57071 1507 aaPredicted RBP16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 TPST1O60507 370 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms