RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 XIRP2A4UGR9 3374 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 CHD7Q9P2D1 2997 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 WDR81Q562E7 1941 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 SH3D21A4FU49 640 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 EDIL3O43854 480 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 ATP9AO75110 1047 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 LGALS2P05162 132 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 CYP2C9P11712 490 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 GJB2P29033 226 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 RFC2P35250 354 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 ETV4P43268 484 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 STAT5BP51692 787 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 NRG3P56975 720 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 LINC00310P59036 64 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 BFSP2Q13515 415 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 ADRM1Q16186 407 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 PTGISQ16647 500 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 CCDC181Q5TID7 509 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 NXNQ6DKJ4 435 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 SERINC5Q86VE9 423 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 GLB1L2Q8IW92 636 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 TCEAL8Q8IYN2 117 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 PPM1NQ8N819 430 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 USP38Q8NB14 1042 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 CCDC148Q8NFR7 591 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 BICD2Q8TD16 824 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 AFAP1L1Q8TED9 768 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 HERVK_113Q902F9 699 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 SPATA25Q9BR10 227 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 C6orf50Q9HD87 102 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 HDAC6Q9UBN7 1215 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 NFASCO94856 1347 aa8.68□□□□□ -1.02
YBX3-204ENST00000366290 IGLV3-22A0A075B6J6 115 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 GSTTP1A0A1W2PQM5 241 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 FFAR3O14843 346 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 IQCF3P0C7M6 154 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 CIITAP33076 1130 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 MYH9P35579 1960 aaKnown RBP8.67□□□□□ -1.02
YBX3-204ENST00000366290 SARSP49591 514 aaKnown RBP8.67□□□□□ -1.02
YBX3-204ENST00000366290 ADKP55263 362 aaKnown RBP8.67□□□□□ -1.02
YBX3-204ENST00000366290 ADAM17P78536 824 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 GUCY1B3Q02153 619 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 MLC1Q15049 377 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 TRIM71Q2Q1W2 868 aaKnown RBP8.67□□□□□ -1.02
YBX3-204ENST00000366290 KRT40Q6A162 431 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 GALNT17Q6IS24 598 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 CXorf57Q6NSI4 855 aaKnown RBP8.67□□□□□ -1.02
YBX3-204ENST00000366290 ZNF365Q70YC5 407 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 EMSYQ7Z589 1322 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 ADGRG2Q8IZP9 1017 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 FBXO18Q8NFZ0 1043 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 PPP1R14CQ8TAE6 165 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 CYP2W1Q8TAV3 490 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 WASF1Q92558 559 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 FATE1Q969F0 183 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 NKD2Q969F2 451 aaPredicted RBP8.67□□□□□ -1.02
YBX3-204ENST00000366290 PGBD1Q96JS3 809 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 WDR92Q96MX6 357 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 AGO4Q9HCK5 861 aaKnown RBP8.67□□□□□ -1.02
YBX3-204ENST00000366290 SMC3Q9UQE7 1217 aa8.67□□□□□ -1.02
YBX3-204ENST00000366290 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.67□□□□□ -1.02
YBX3-204ENST00000366290 IGKV6D-21A0A0A0MT36 114 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 A0A1B0GTL3 188 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.66□□□□□ -1.02
YBX3-204ENST00000366290 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.66□□□□□ -1.02
YBX3-204ENST00000366290 FAM86B1E9PN63 330 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 CAND2O75155 1236 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 CXCL10P02778 98 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 MMP1P03956 469 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 FAM86B2P0C5J1 330 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 SMIM10L2AP0DMW4 78 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 SMIM10L2BP0DMW5 78 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 AFF3P51826 1226 aaKnown RBP8.66□□□□□ -1.02
YBX3-204ENST00000366290 CCL23P55773 120 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 NLRP5P59047 1200 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 MGAT5Q09328 741 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 MALLQ13021 153 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 ITGB3BPQ13352 177 aaPredicted RBP8.66□□□□□ -1.02
YBX3-204ENST00000366290 GPNMBQ14956 572 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 EARS2Q5JPH6 523 aaKnown RBP8.66□□□□□ -1.02
YBX3-204ENST00000366290 JAKMIP3Q5VZ66 844 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 RPAINQ86UA6 219 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 LRRC56Q8IYG6 542 aaPredicted RBP8.66□□□□□ -1.02
YBX3-204ENST00000366290 BLIDQ8IZY5 108 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 CARFQ8N187 725 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 SEPT1Q8WYJ6 367 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 LENG9Q96B70 501 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 C8orf76Q96K31 380 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 C8orf48Q96LL4 319 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 OSBPL6Q9BZF3 934 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 TMEM168Q9H0V1 697 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 CSRNP2Q9H175 543 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 RNPEPQ9H4A4 650 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 ZNF215Q9UL58 517 aaPredicted RBP8.66□□□□□ -1.02
YBX3-204ENST00000366290 TRANK1O15050 2925 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 GBF1Q92538 1859 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 BDP1A6H8Y1 2624 aa8.66□□□□□ -1.02
YBX3-204ENST00000366290 NRCAMQ92823 1304 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 GRXCR1A8MXD5 290 aa8.65□□□□□ -1.02
YBX3-204ENST00000366290 BTBD18B2RXH4 712 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms