RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ABHD5Q8WTS1 349 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 GJA10Q969M2 543 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 ZNF566Q969W8 418 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 KAZALD1Q96I82 304 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 VPS50Q96JG6 964 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 TNIP3Q96KP6 325 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 C5orf34Q96MH7 638 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 FYTTD1Q96QD9 318 aaKnown RBP3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 ELAC2Q9BQ52 826 aaKnown RBP3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 SAP30LQ9HAJ7 183 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 USP29Q9HBJ7 922 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 VPS45Q9NRW7 570 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 TMOD4Q9NZQ9 345 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 FLRT1Q9NZU1 646 aa3.78□□□□□ -1.8
RNU4-48P-201ENST00000365559 UBE2Q2LH0YL09 131 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 PODXLO00592 558 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 MBPP02686 304 aaPredicted RBP3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 CHRM5P08912 532 aaPredicted RBP3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 IDEP14735 1019 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 CFHR3Q02985 330 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 ATP1A4Q13733 1029 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 LARS2Q15031 903 aaKnown RBP3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 MAPKAPK3Q16644 382 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 SLC5A9Q2M3M2 681 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 TMEM65Q6PI78 240 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 DCDC5Q6ZRR9 648 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 NOL8Q76FK4 1167 aaKnown RBP3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 P3H2Q8IVL5 708 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 FAM186BQ8IYM0 893 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 C12orf76Q8N812 135 aaPredicted RBP3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 NGDNQ8NEJ9 315 aaKnown RBP3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 CCDC17Q96LX7 622 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 QTRT1Q9BXR0 403 aaKnown RBP3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 EIF2AQ9BY44 585 aaKnown RBP3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 TMEM8AQ9HCN3 771 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 PDGFCQ9NRA1 345 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 GAR1Q9NY12 217 aaKnown RBP3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 CEP83Q9Y592 693 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 PCDHB2Q9Y5E7 798 aa3.77□□□□□ -1.81
RNU4-48P-201ENST00000365559 OR2W5A6NFC9 320 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 BTBD19C9JJ37 291 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 H3BNC9 293 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 CLIC1O00299 241 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 PPP6CO00743 305 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 FYB1O15117 783 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 ZSCAN9O15535 394 aaPredicted RBP3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 PLIN1O60240 522 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 PLA2G6O60733 806 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 USP1O94782 785 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 IFIT2P09913 472 aaKnown RBP3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 TMIGD3P0DMS9 266 aaPredicted RBP3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 DRD1P21728 446 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 EPHB2P29323 1055 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 SERPINB3P29508 390 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 GALNSP34059 522 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 ABCG1P45844 678 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 RAE1P78406 368 aaKnown RBP3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 TXNL4AP83876 142 aaKnown RBP3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 DNASE1L3Q13609 305 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 KCNJ12Q14500 433 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 KCNB1Q14721 858 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 MFSD13AQ14CX5 517 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 SEC23BQ15437 767 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 SUPT20HL1Q3ZLR7 823 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 CERKLQ49MI3 558 aaPredicted RBP3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 TMEM196Q5HYL7 178 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 DGKKQ5KSL6 1271 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 FAM90A2PQ658T7 463 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 FBXO38Q6PIJ6 1188 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 YTHDF3Q7Z739 585 aaKnown RBP3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 KRT73Q86Y46 540 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 FAM71DQ8N9W8 422 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 PNISRQ8TF01 805 aaKnown RBP3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 GRAMD1AQ96CP6 724 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 HS6ST2Q96MM7 605 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 EFHD1Q9BUP0 239 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 PCGF6Q9BYE7 350 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 NLRC4Q9NPP4 1024 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 CDC23Q9UJX2 597 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 FZD4Q9ULV1 537 aa3.76□□□□□ -1.81
RNU4-48P-201ENST00000365559 COL3A1P02461 1466 aaPredicted RBP3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 CCDC194A0A1B0GVG4 234 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 SMIM35A0A1B0GVV1 85 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 DNAJC9-AS1A6NH13 148 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 TMEM232C9JQI7 657 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 DHHO43323 396 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 VIPP01282 170 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 TUBB4AP04350 444 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 PRR35P0CG20 571 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 SRGAP2BP0DMP2 458 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 CERS1P27544 350 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 NSUN2Q08J23 767 aaKnown RBP eCLIP3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 CCDC15Q0P6D6 951 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 SLC14A1Q13336 389 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 RAB30Q15771 203 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 ZKSCAN2Q63HK3 967 aa3.75□□□□□ -1.81
RNU4-48P-201ENST00000365559 SLC18B1Q6NT16 456 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms