RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 MTAPQ13126 283 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 IFIT5Q13325 482 aaKnown RBP4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 SEC23BQ15437 767 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 Q4G0T1 1027 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 EPHA10Q5JZY3 1008 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 FAXCQ5TGI0 409 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 MEX3CQ5U5Q3 659 aaKnown RBP4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 GRHL2Q6ISB3 625 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 BEND5Q7L4P6 421 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 C16orf71Q8IYS4 520 aaPredicted RBP4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 RNF152Q8N8N0 203 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 CCDC150Q8NCX0 1101 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 SUN3Q8TAQ9 357 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 HIC2Q96JB3 615 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 CINPQ9BW66 212 aaPredicted RBP4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 VPS16Q9H269 839 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 ZBTB26Q9HCK0 441 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 GJB4Q9NTQ9 266 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 TUBA8Q9NY65 449 aaPredicted RBP4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 MYO1AQ9UBC5 1043 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 FZD4Q9ULV1 537 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 MAFFQ9ULX9 164 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 ZNF521Q96K83 1311 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 A0A1W2PPC4 97 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 APOL1O14791 398 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 CCNT2O60583 730 aaKnown RBP4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 COQ9O75208 318 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 MOSPD3O75425 235 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 ARP10275 920 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 MYL4P12829 197 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 TRIM27P14373 513 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 GHRHRQ02643 423 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 SLC14A1Q13336 389 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 FHL3Q13643 280 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 TRIP6Q15654 476 aaKnown RBP4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 TMTC4Q5T4D3 741 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 ABLIM2Q6H8Q1 611 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 GLCCI1Q86VQ1 547 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 ABHD5Q8WTS1 349 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 MAP4K1Q92918 833 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 CUL5Q93034 780 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 KAZALD1Q96I82 304 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 ZC3H10Q96K80 434 aaKnown RBP4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 COLEC11Q9BWP8 271 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 SPRTNQ9H040 489 aaPredicted RBP4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 VPS45Q9NRW7 570 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 TMOD4Q9NZQ9 345 aa4.81□□□□□ -1.64
RNU6-553P-201ENST00000364047 PPEF2O14830 753 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 MYL3P08590 195 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 TMIGD3P0DMS9 266 aaPredicted RBP4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 IDEP14735 1019 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 MST1P26927 711 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 GALNSP34059 522 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 PBX1P40424 430 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 DGKQP52824 942 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 DNASE1L3Q13609 305 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 ACOX1Q15067 660 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 RABEP1Q15276 862 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 AASDHQ4L235 1098 aaPredicted RBP4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 PXDC1Q5TGL8 231 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 MRNIPQ6NTE8 343 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 USP17L6PQ6QN14 398 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 CCDC28AQ8IWP9 274 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 PJA1Q8NG27 643 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 PRR11Q96HE9 360 aaPredicted RBP4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 CCDC136Q96JN2 1154 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 ADGRE3Q9BY15 652 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 SAP30LQ9HAJ7 183 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 TRNAU1APQ9NX07 287 aaKnown RBP4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 ELOVL5Q9NYP7 299 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 PI4KBQ9UBF8 816 aa4.8□□□□□ -1.64
RNU6-553P-201ENST00000364047 ADAM10O14672 748 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 KCNQ3O43525 872 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 DRD1P21728 446 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 PLCD1P51178 756 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 JAK3P52333 1124 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 WDR5P61964 334 aaKnown RBP4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 YPEL5P62699 121 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 RAE1P78406 368 aaKnown RBP4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 PMS2P11Q13670 270 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 HLTFQ14527 1009 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 KPNB1Q14974 876 aaKnown RBP4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 PFKFB3Q16875 520 aaPredicted RBP4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 ANO7Q6IWH7 933 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 KSR2Q6VAB6 950 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 NANOGP1Q8N7R0 232 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 SNX27Q96L92 541 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 ZNF48Q96MX3 618 aaPredicted RBP4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 FCRL4Q96PJ5 515 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 WDR24Q96S15 920 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 NAA15Q9BXJ9 866 aaKnown RBP4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 PCDHAC1Q9H158 963 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 STARD7Q9NQZ5 370 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 PCDHB2Q9Y5E7 798 aa4.79□□□□□ -1.64
RNU6-553P-201ENST00000364047 CBFA2T3O75081 653 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 NDST3O95803 873 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 MBPP02686 304 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms