RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 ILKAPQ9H0C8 392 aaPredicted RBP12.38□□□□□ -0.43
EPHB4-202ENST00000360620 CCDC189A1A4V9 331 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 STRNO43815 780 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 SERPINA6P08185 405 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 CFHP08603 1231 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 LCP1P13796 627 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 NOVP48745 357 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 GDF10P55107 478 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 ATF7IP2Q5U623 682 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 SH3BP5LQ7L8J4 393 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 CCDC60Q8IWA6 550 aaPredicted RBP12.38□□□□□ -0.43
EPHB4-202ENST00000360620 FAM172AQ8WUF8 416 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 LRRN4Q8WUT4 740 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 EZH1Q92800 747 aaPredicted RBP12.38□□□□□ -0.43
EPHB4-202ENST00000360620 SERAC1Q96JX3 654 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 GRIP2Q9C0E4 1043 aa12.38□□□□□ -0.43
EPHB4-202ENST00000360620 SDR42E2A6NKP2 422 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SIGLEC16A6NMB1 481 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 RTN3O95197 1032 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SUPT20HL2P0C7V6 817 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 RARBP10826 455 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 TSHRP16473 764 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 PMLP29590 882 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 RGS2P41220 211 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 HDAC4P56524 1084 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 GAD2Q05329 585 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 OASLQ15646 514 aaKnown RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SUPT20HL1Q3ZLR7 823 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 CGB2Q6NT52 195 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 MTHFD1LQ6UB35 978 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 BRSK2Q8IWQ3 736 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 FAM81AQ8TBF8 368 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 USP13Q92995 863 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 THAP11Q96EK4 314 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 NT5C1AQ9BXI3 368 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 MRPL40Q9NQ50 206 aaKnown RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SNX9Q9Y5X1 595 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 TRDMT1O14717 391 aaKnown RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SUPT3HO75486 399 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 LYPLA1O75608 230 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 TMEM63AO94886 807 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 NEK3P51956 506 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 CHN2P52757 468 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 HIRAP54198 1017 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 MRPS22P82650 360 aaKnown RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 PDK2Q15119 407 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 KIF19Q2TAC6 998 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 TXNRD3NBQ6F5E7 133 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 DRICH1Q6PGQ1 229 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 C4orf22Q6V702 233 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 LCA5Q86VQ0 697 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 CHSY1Q86X52 802 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SIX6OS1Q8N1H7 587 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 USP6NLQ92738 828 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 WRNIP1Q96S55 665 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 CHCHD3Q9NX63 227 aaKnown RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 POLIQ9UNA4 740 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SORCS3Q9UPU3 1222 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 AURKCQ9UQB9 309 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 PLLPQ9Y342 182 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 CACNA1SQ13698 1873 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 PMM2O15305 246 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 CHADO15335 359 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 CCNE2O96020 404 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 PSMC3P17980 439 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 CNTFP26441 200 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 CASP2P42575 452 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 CDC16Q13042 620 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 MXD4Q14582 209 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 KYAT3Q6YP21 454 aaKnown RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SETD3Q86TU7 594 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-202ENST00000360620 RNF135Q8IUD6 432 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 DDI1Q8WTU0 396 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 TCF7L2Q9NQB0 619 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 SLC39A10Q9ULF5 831 aa12.37□□□□□ -0.43
EPHB4-202ENST00000360620 PHLPP1O60346 1717 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 TYROBPO43914 113 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 LRCH4O75427 683 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 HMGCRP04035 888 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 PHKA2P46019 1235 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 NME3Q13232 169 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 USP10Q14694 798 aaKnown RBP12.36□□□□□ -0.43
EPHB4-202ENST00000360620 C15orf59Q2T9L4 293 aaPredicted RBP12.36□□□□□ -0.43
EPHB4-202ENST00000360620 RSBN1LQ6PCB5 846 aaPredicted RBP12.36□□□□□ -0.43
EPHB4-202ENST00000360620 DDX1Q92499 740 aaKnown RBP12.36□□□□□ -0.43
EPHB4-202ENST00000360620 PTPRN2Q92932 1015 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 GFM2Q969S9 779 aaKnown RBP12.36□□□□□ -0.43
EPHB4-202ENST00000360620 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 SLC7A8Q9UHI5 535 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 HBS1LQ9Y450 684 aaKnown RBP12.36□□□□□ -0.43
EPHB4-202ENST00000360620 SMIM31A0A1B0GVY4 71 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 TMCC1O94876 653 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 ATP5BP06576 529 aaKnown RBP12.36□□□□□ -0.43
EPHB4-202ENST00000360620 VAV1P15498 845 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 GNAZP19086 355 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 CDK7P50613 346 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 NRLP54845 237 aa12.36□□□□□ -0.43
EPHB4-202ENST00000360620 GPX6P59796 221 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms