RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 CYP4X1Q8N118 509 aa10.27□□□□□ -0.77
SIN3A-201ENST00000360439 SIX6OS1Q8N1H7 587 aa10.27□□□□□ -0.77
SIN3A-201ENST00000360439 NACC2Q96BF6 587 aa10.27□□□□□ -0.77
SIN3A-201ENST00000360439 HSPBAP1Q96EW2 488 aa10.27□□□□□ -0.77
SIN3A-201ENST00000360439 DCUN1D5Q9BTE7 237 aa10.27□□□□□ -0.77
SIN3A-201ENST00000360439 TARS2Q9BW92 718 aaKnown RBP10.27□□□□□ -0.77
SIN3A-201ENST00000360439 ALG6Q9Y672 507 aa10.27□□□□□ -0.77
SIN3A-201ENST00000360439 CHD4Q14839 1912 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 ZNF263O14978 683 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 KRT1P04264 644 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 KRT6CP48668 564 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 GJA9P57773 515 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 RSBN1Q5VWQ0 802 aaPredicted RBP10.26□□□□□ -0.77
SIN3A-201ENST00000360439 PLEKHA7Q6IQ23 1121 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 DDX42Q86XP3 938 aaKnown RBP eCLIP10.26□□□□□ -0.77
SIN3A-201ENST00000360439 LRRC49Q8IUZ0 686 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 PDGFCQ9NRA1 345 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 KLK14Q9P0G3 267 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 RASA4BC9J798 803 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 EPHB6O15197 1021 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 RASA4O43374 803 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 FGFR4P22455 802 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 ZNF132P52740 706 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 CCL23P55773 120 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 PLA2G4EQ3MJ16 856 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 NOL9Q5SY16 702 aaKnown RBP10.26□□□□□ -0.77
SIN3A-201ENST00000360439 RASAL3Q86YV0 1011 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 GRAMD2AQ8IUY3 354 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 GPD1LQ8N335 351 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 RBBP8NLQ8NC74 664 aaPredicted RBP10.26□□□□□ -0.77
SIN3A-201ENST00000360439 SLAIN1Q8ND83 568 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 REPS2Q8NFH8 660 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 DDI1Q8WTU0 396 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 SNX27Q96L92 541 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 ATP6V1C1P21283 382 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 EEF1B2P24534 225 aaKnown RBP10.26□□□□□ -0.77
SIN3A-201ENST00000360439 TBXAS1P24557 533 aaPredicted RBP10.26□□□□□ -0.77
SIN3A-201ENST00000360439 C21orf59P57076 290 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 DUOXA2Q1HG44 320 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 ZC2HC1CQ53FD0 456 aaPredicted RBP10.26□□□□□ -0.77
SIN3A-201ENST00000360439 NECAB2Q7Z6G3 386 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 ATP8B4Q8TF62 1192 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 PHF12Q96QT6 1004 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 CELF4Q9BZC1 486 aaKnown RBP10.26□□□□□ -0.77
SIN3A-201ENST00000360439 KCTD10Q9H3F6 313 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 ZNF510Q9Y2H8 683 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 C2CD2LO14523 706 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 MAGEB3O15480 346 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 TRIM16O95361 564 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 GTF2H1P32780 548 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 FCHO2Q0JRZ9 810 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 RINT1Q6NUQ1 792 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 SLC13A5Q86YT5 568 aaPredicted RBP10.26□□□□□ -0.77
SIN3A-201ENST00000360439 NPLOC4Q8TAT6 608 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 AGPAT3Q9NRZ7 376 aa10.26□□□□□ -0.77
SIN3A-201ENST00000360439 A0A087WZ62 844 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 IQANK1A0A1B0GTG1 560 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 SH3D21A4FU49 640 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 TBKBP1A7MCY6 615 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 VEGFBP49765 207 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 ASTE1Q2TB18 679 aaPredicted RBP10.25□□□□□ -0.77
SIN3A-201ENST00000360439 CLVS1Q8IUQ0 354 aaPredicted RBP10.25□□□□□ -0.77
SIN3A-201ENST00000360439 TMEM169Q96HH4 297 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 FDXACB1Q9BRP7 624 aaPredicted RBP10.25□□□□□ -0.77
SIN3A-201ENST00000360439 FGFR1OP2Q9NVK5 253 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 F8W810 466 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 DPYSL4O14531 572 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 EXTL3O43909 919 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 CABYRO75952 493 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 UBOX5O94941 541 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 LGALS2P05162 132 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 TRIM49P0CI25 452 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 TRIM49CP0CI26 452 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 PCNAP12004 261 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 MYH6P13533 1939 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 COPS2P61201 443 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 KCNJ2P63252 427 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 ARSHQ5FYA8 562 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 UNC45BQ8IWX7 931 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 FBXL13Q8NEE6 735 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 COL22A1Q8NFW1 1626 aaPredicted RBP10.25□□□□□ -0.77
SIN3A-201ENST00000360439 RNF139Q8WU17 664 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 HES6Q96HZ4 224 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 MAGEB18Q96M61 343 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 HSPBP1Q9NZL4 362 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 USP12O75317 370 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 INHAP05111 366 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 COMTP21964 271 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 SLC9A3P48764 834 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 CDR2Q01850 454 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 CNPY1Q3B7I2 92 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 SH3D19Q5HYK7 790 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 EMC10Q5UCC4 262 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 SNX30Q5VWJ9 437 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 LRRC37BQ96QE4 947 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 RUSC1Q9BVN2 902 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 TYW5A2RUC4 315 aaKnown RBP10.25□□□□□ -0.77
SIN3A-201ENST00000360439 TCP11X1B4DZS4 312 aa10.25□□□□□ -0.77
SIN3A-201ENST00000360439 AKAP3O75969 853 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms