RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 KLHL32Q96NJ5 620 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 ABCB10Q9NRK6 738 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 WBP11Q9Y2W2 641 aaKnown RBP13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 DGAT1O75907 488 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 ATG7O95352 703 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 EPHB2P29323 1055 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 HK2P52789 917 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 CYP24A1Q07973 514 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 GRAPQ13588 217 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 C2CD6Q53TS8 623 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 MACC1Q6ZN28 852 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 GRAPLQ8TC17 118 aaPredicted RBP13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 GIPC3Q8TF64 312 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 JMJD4Q9H9V9 463 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 PLGRKTQ9HBL7 147 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 COQ6Q9Y2Z9 468 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 FMR1Q06787 632 aaKnown RBP eCLIP13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 PFKFB3Q16875 520 aaPredicted RBP13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 TMPRSS6Q8IU80 811 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 PRDM5Q9NQX1 630 aaPredicted RBP13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 ATXN10Q9UBB4 475 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 TELO2Q9Y4R8 837 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 RCVRNP35243 200 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 CCNIQ14094 377 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 CCDC153Q494R4 210 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 TMEM26Q6ZUK4 368 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 MNTQ99583 582 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 COMMD3-BMI1R4GMX3 469 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 MGAT4DA6NG13 374 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 MYL12AP19105 171 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 ALDH5A1P51649 535 aaPredicted RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 SREBF2Q12772 1141 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 ZNF557Q8N988 423 aaPredicted RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 FBXO28Q9NVF7 368 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 ITSN1Q15811 1721 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 IFRD1O00458 451 aaPredicted RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 RPS6KA5O75582 802 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 MOCS2O96007 188 aaPredicted RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 GYPCP04921 128 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 AVPR1AP37288 418 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 GPR1P46091 355 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 TDRD5Q8NAT2 981 aaKnown RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 OR7A2PQ8NGA2 310 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 MIEF1Q9NQG6 463 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 PRDM4Q9UKN5 801 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 LOC100506127A0A0U1RQW1 187 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 TIMM44O43615 452 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 NFICP08651 508 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 CYP2C8P10632 490 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 POC5Q8NA72 575 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 HPS3Q969F9 1004 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 LXNQ9BS40 222 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 EEF2KO00418 725 aaKnown RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 COMTP21964 271 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 PAICSP22234 425 aaKnown RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 FAM98BQ52LJ0 330 aaKnown RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 PARK7Q99497 189 aaKnown RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 GLRA3O75311 464 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 VPS26AO75436 327 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 ATF4P18848 351 aaPredicted RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 VAC14Q08AM6 782 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 TDRD10Q5VZ19 366 aaKnown RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 ZNF248Q8NDW4 579 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 APOL5Q9BWW9 433 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 PRELID1Q9Y255 219 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 ZDHHC9Q9Y397 364 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 MAP2P11137 1827 aaKnown RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 ODC1P11926 461 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 ALDH7A1P49419 539 aaKnown RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 PCSK7Q16549 785 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 XRRA1Q6P2D8 792 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 SEPHS2Q99611 448 aa13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 TRIT1Q9H3H1 467 aaKnown RBP13.57□□□□□ -0.24
SRGAP3-201ENST00000360413 PTPRKQ15262 1439 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 RRN3P2A6NIE6 340 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 MAPK7Q13164 816 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 PTPAQ15257 358 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 TIMM50Q3ZCQ8 353 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 NOTUMQ6P988 496 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 ATP6V0D2Q8N8Y2 350 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 NT5C1AQ9BXI3 368 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 PUS3Q9BZE2 481 aaKnown RBP13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 DYRK1BQ9Y463 629 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 LDOC1O95751 146 aaPredicted RBP13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 HAVCR1Q96D42 359 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 PABPC5Q96DU9 382 aaKnown RBP13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 ZNF180Q9UJW8 692 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 DUSP12Q9UNI6 340 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 MGRN1O60291 552 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 L2HGDHQ9H9P8 463 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 ZFYVE16Q7Z3T8 1539 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 CCDC162PA2VCL2 907 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 VIL1P09327 827 aaKnown RBP13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 ACADMP11310 421 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 FAM71DQ8N9W8 422 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 WRNIP1Q96S55 665 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 MKNK1Q9BUB5 465 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 ZNF112Q9UJU3 913 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms