RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 FGF18O76093 207 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 URODP06132 367 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 ATP2A2P16615 1042 aaKnown RBP24.14■■□□□ 1.46
SDF4-202ENST00000360001 COILP38432 576 aaPredicted RBP24.14■■□□□ 1.46
SDF4-202ENST00000360001 DEUP1Q05D60 604 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 NME3Q13232 169 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 DPYSL3Q14195 570 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 FAM71BQ8TC56 605 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 RUBCNQ92622 972 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 CALN1Q9BXU9 219 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 DCLK3Q9C098 648 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 FBXO44Q9H4M3 255 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 COX16Q9P0S2 106 aa24.14■■□□□ 1.46
SDF4-202ENST00000360001 AFF4Q9UHB7 1163 aaKnown RBP24.14■■□□□ 1.46
SDF4-202ENST00000360001 FAM92AA1XBS5 289 aa24.14■■□□□ 1.45
SDF4-202ENST00000360001 ABLIM3O94929 683 aa24.14■■□□□ 1.45
SDF4-202ENST00000360001 FNTAP49354 379 aa24.14■■□□□ 1.45
SDF4-202ENST00000360001 PDK2Q15119 407 aa24.14■■□□□ 1.45
SDF4-202ENST00000360001 CCDC137Q6PK04 289 aaKnown RBP24.14■■□□□ 1.45
SDF4-202ENST00000360001 NMUR1Q9HB89 426 aa24.14■■□□□ 1.45
SDF4-202ENST00000360001 PCDH18Q9HCL0 1135 aa24.14■■□□□ 1.45
SDF4-202ENST00000360001 ABCC13Q9NSE7 274 aa24.14■■□□□ 1.45
SDF4-202ENST00000360001 AP4E1Q9UPM8 1137 aa24.14■■□□□ 1.45
SDF4-202ENST00000360001 ZNF638Q14966 1978 aaKnown RBP24.13■■□□□ 1.45
SDF4-202ENST00000360001 ZSCAN5CA6NGD5 496 aaPredicted RBP24.13■■□□□ 1.45
SDF4-202ENST00000360001 PTGIRP43119 386 aa24.13■■□□□ 1.45
SDF4-202ENST00000360001 RPL10AP62906 217 aaKnown RBP24.13■■□□□ 1.45
SDF4-202ENST00000360001 DR1Q01658 176 aa24.13■■□□□ 1.45
SDF4-202ENST00000360001 MMRN1Q13201 1228 aa24.13■■□□□ 1.45
SDF4-202ENST00000360001 DPYSL2Q16555 572 aa24.13■■□□□ 1.45
SDF4-202ENST00000360001 DENND5BQ6ZUT9 1274 aa24.13■■□□□ 1.45
SDF4-202ENST00000360001 ZNF461Q8TAF7 563 aa24.13■■□□□ 1.45
SDF4-202ENST00000360001 AUTS2Q8WXX7 1259 aa24.13■■□□□ 1.45
SDF4-202ENST00000360001 WDR6Q9NNW5 1121 aaKnown RBP24.13■■□□□ 1.45
SDF4-202ENST00000360001 FZD10Q9ULW2 581 aa24.13■■□□□ 1.45
SDF4-202ENST00000360001 LCHNA4D1U4 455 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 ATF6P18850 670 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 IL4RP24394 825 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 L1CAMP32004 1257 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 KRT17Q04695 432 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 DHX34Q14147 1143 aaKnown RBP24.12■■□□□ 1.45
SDF4-202ENST00000360001 KRT81Q14533 505 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 BRD3Q15059 726 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 CCNG2Q16589 344 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 KCTD19Q17RG1 926 aaPredicted RBP24.12■■□□□ 1.45
SDF4-202ENST00000360001 BBS12Q6ZW61 710 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 MAP7D3Q8IWC1 876 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 LBHD1Q9BQE6 289 aaPredicted RBP24.12■■□□□ 1.45
SDF4-202ENST00000360001 MAGEB5Q9BZ81 275 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 HOMER3Q9NSC5 361 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 DDIT4Q9NX09 232 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 MTMR10Q9NXD2 777 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 A0A1W2PQH9 124 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 CCDC151A5D8V7 595 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 BHMG1C9JSJ3 638 aaPredicted RBP24.12■■□□□ 1.45
SDF4-202ENST00000360001 TLL1O43897 1013 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 RTN3O95197 1032 aaPredicted RBP24.12■■□□□ 1.45
SDF4-202ENST00000360001 DNAJB2P25686 324 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 KCNJ1P48048 391 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 CLCN6P51797 869 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 GUCY2DQ02846 1103 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 RASIP1Q5U651 963 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 BTBD8Q5XKL5 378 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 TPGS2Q68CL5 300 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 TAC4Q86UU9 113 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 MON1AQ86VX9 555 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 GPR65Q8IYL9 337 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 DQX1Q8TE96 717 aaKnown RBP24.12■■□□□ 1.45
SDF4-202ENST00000360001 FAM118BQ9BPY3 351 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 DHX35Q9H5Z1 703 aaKnown RBP24.12■■□□□ 1.45
SDF4-202ENST00000360001 GDF3Q9NR23 364 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 ARGLU1Q9NWB6 273 aaPredicted RBP24.12■■□□□ 1.45
SDF4-202ENST00000360001 OSER1Q9NX31 292 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 STK39Q9UEW8 545 aa24.12■■□□□ 1.45
SDF4-202ENST00000360001 CST8O60676 142 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 LILRB3O75022 631 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 SEC24AO95486 1093 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 MCM3P25205 808 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 YWHAQP27348 245 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 SNX1Q13596 522 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 MTMR3Q13615 1198 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 VSIG1Q86XK7 387 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 PSTKQ8IV42 348 aaKnown RBP24.11■■□□□ 1.45
SDF4-202ENST00000360001 KLHL23Q8NBE8 558 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 RUNDC3BQ96NL0 473 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 ZBP1Q9H171 429 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 FAM204AQ9H8W3 233 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 EPB41L5Q9HCM4 733 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 MRPL17Q9NRX2 175 aaKnown RBP24.11■■□□□ 1.45
SDF4-202ENST00000360001 F9P00740 461 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 IGLV3-25P01717 112 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 ATF2P15336 505 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 TUFMP49411 452 aaKnown RBP24.11■■□□□ 1.45
SDF4-202ENST00000360001 DYNLT1P63172 113 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 RAB33AQ14088 237 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 RFX6Q8HWS3 928 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 KCTD15Q96SI1 283 aaPredicted RBP24.11■■□□□ 1.45
SDF4-202ENST00000360001 TMPRSS4Q9NRS4 437 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 COMMD8Q9NX08 183 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 GMIPQ9P107 970 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms