RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 BACE2Q9Y5Z0 518 aa14.06□□□□□ -0.16
CCDC197-201ENST00000359253 MICAL3Q7RTP6 2002 aa14.06□□□□□ -0.16
CCDC197-201ENST00000359253 LIASO43766 372 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 CST8O60676 142 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 EFEMP2O95967 443 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 ITIH2P19823 946 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 TGM2P21980 687 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 PBX2P40425 430 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 NDUFV1P49821 464 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 RABGGTBP53611 331 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 BYSLQ13895 437 aaKnown RBP14.05□□□□□ -0.16
CCDC197-201ENST00000359253 HLTFQ14527 1009 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCDC197-201ENST00000359253 CASP8Q14790 479 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 SMTNL2Q2TAL5 461 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 ARL13BQ3SXY8 428 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 KCNT1Q5JUK3 1230 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 ZNF697Q5TEC3 545 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 KAZNQ674X7 775 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 CEP128Q6ZU80 1094 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 CYP4V2Q6ZWL3 525 aaPredicted RBP14.05□□□□□ -0.16
CCDC197-201ENST00000359253 BZW1Q7L1Q6 419 aaKnown RBP14.05□□□□□ -0.16
CCDC197-201ENST00000359253 FIBCD1Q8N539 461 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.05□□□□□ -0.16
CCDC197-201ENST00000359253 FAF2Q96CS3 445 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 LRCH3Q96II8 777 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 RNF157Q96PX1 679 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 PEBP4Q96S96 227 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 GPR62Q9BZJ7 368 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 ZNF576Q9H609 170 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 CWH43Q9H720 699 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 CHST7Q9NS84 486 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 ABCC13Q9NSE7 274 aa14.05□□□□□ -0.16
CCDC197-201ENST00000359253 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCDC197-201ENST00000359253 MTRF1LQ9UGC7 380 aaKnown RBP14.05□□□□□ -0.16
CCDC197-201ENST00000359253 FNDC1Q4ZHG4 1894 aaPredicted RBP14.04□□□□□ -0.16
CCDC197-201ENST00000359253 YJEFN3A6XGL0 299 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 E7ENQ6 273 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 F8W810 466 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 TNFRSF10BO14763 440 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 SEC31AO94979 1220 aaKnown RBP14.04□□□□□ -0.16
CCDC197-201ENST00000359253 RTN3O95197 1032 aaPredicted RBP14.04□□□□□ -0.16
CCDC197-201ENST00000359253 RB1P06400 928 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 USP17L7P0C7H9 530 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 KRT10P13645 584 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 LAG3P18627 525 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 STIP1P31948 543 aaKnown RBP14.04□□□□□ -0.16
CCDC197-201ENST00000359253 NR2C2P49116 596 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 PSEN1P49768 467 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 GATMP50440 423 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 VCPP55072 806 aaKnown RBP14.04□□□□□ -0.16
CCDC197-201ENST00000359253 ERVK-21P61565 698 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 RPL10AP62906 217 aaKnown RBP14.04□□□□□ -0.16
CCDC197-201ENST00000359253 DEUP1Q05D60 604 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 CALCOCO2Q13137 446 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 DPYSL3Q14195 570 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 CCDC142Q17RM4 750 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 SH3PXD2AQ5TCZ1 1133 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 ALS2CLQ60I27 953 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 CEP57Q86XR8 500 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 RFX6Q8HWS3 928 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 RNF168Q8IYW5 571 aaPredicted RBP14.04□□□□□ -0.16
CCDC197-201ENST00000359253 NUP93Q8N1F7 819 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 SLC35B2Q8TB61 432 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 PIK3R5Q8WYR1 880 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 CLP1Q92989 425 aaKnown RBP14.04□□□□□ -0.16
CCDC197-201ENST00000359253 IGSF21Q96ID5 467 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 SPATA17Q96L03 361 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 ZNF558Q96NG5 402 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 TMEM209Q96SK2 561 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 HERPUD2Q9BSE4 406 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 SNRNP25Q9BV90 132 aaKnown RBP14.04□□□□□ -0.16
CCDC197-201ENST00000359253 CALN1Q9BXU9 219 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 FOXP3Q9BZS1 431 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 PCDH18Q9HCL0 1135 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 AAASQ9NRG9 546 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 KLHL11Q9NVR0 708 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 FAM53CQ9NYF3 392 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 IL37Q9NZH6 218 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 OGFRQ9NZT2 677 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 FZD10Q9ULW2 581 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 MAFFQ9ULX9 164 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 NFU1Q9UMS0 254 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 AP4E1Q9UPM8 1137 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 SCML2Q9UQR0 700 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 YBX2Q9Y2T7 364 aaKnown RBP14.04□□□□□ -0.16
CCDC197-201ENST00000359253 LAMA3Q16787 3333 aa14.04□□□□□ -0.16
CCDC197-201ENST00000359253 LINC01553A4QN01 128 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 CFAP69A5D8W1 941 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 M0QYT0 321 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 SMAPO00193 183 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 DAPK3O43293 454 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 CA3P07451 260 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 MYBL2P10244 700 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 NCAM1P13591 858 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 CYP2F1P24903 491 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 L1CAMP32004 1257 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 PPM1AP35813 382 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 ARL4AP40617 200 aa14.03□□□□□ -0.16
CCDC197-201ENST00000359253 TNNT3P45378 269 aaPredicted RBP14.03□□□□□ -0.16
CCDC197-201ENST00000359253 HCAR3P49019 387 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms