RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 C12orf4Q9NQ89 552 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ARHGEF3Q9NR81 526 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 TUBGCP4Q9UGJ1 667 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SIK3Q9Y2K2 1263 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PI4KAP42356 2102 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PENKP01210 267 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ACADVLP49748 655 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 NME5P56597 212 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 DGCR6Q14129 220 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KLHDC10Q6PID8 442 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CROTQ9UKG9 612 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ITGA11Q9UKX5 1188 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 FADS3Q9Y5Q0 445 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 MED13Q9UHV7 2174 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PSMD12O00232 456 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 FOXN3O00409 490 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 NDUFB5O43674 189 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CST8O60676 142 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 TRIM13O60858 407 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 RPL14P50914 215 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PUDPQ08623 228 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 VAC14Q08AM6 782 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 NME3Q13232 169 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CYP2R1Q6VVX0 501 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KCTD1Q719H9 257 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 C16orf62Q7Z3J2 963 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 NT5DC3Q86UY8 548 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 OR7A2PQ8NGA2 310 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 HTRA1Q92743 480 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 NARS2Q96I59 477 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 FAM213AQ9BRX8 229 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SPATA7Q9P0W8 599 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SRP68Q9UHB9 627 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 HS6ST1O60243 411 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ABL1P00519 1130 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 RUNDC3AQ59EK9 446 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 OTOAQ7RTW8 1153 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 DAGLBQ8NCG7 672 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SGF29Q96ES7 293 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 DCUN1D1Q96GG9 259 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 BDH2Q9BUT1 245 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 EBF3Q9H4W6 596 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 IMPAD1Q9NX62 359 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CRNNQ9UBG3 495 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CDV3Q9UKY7 258 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CNTNAP5Q8WYK1 1306 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 TTC28Q96AY4 2481 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 FAM237AA0A1B0GTK4 181 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 NOS1APO75052 506 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KATNA1O75449 491 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 FASP25445 335 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 TTC39CQ8N584 583 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ASZ1Q8WWH4 475 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ERLEC1Q96DZ1 483 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KBTBD4Q9NVX7 518 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ARPC4-TTLL3A0A0A6YYG9 625 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KRT20P35900 424 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 GP5P40197 560 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 RECQLP46063 649 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CDC16Q13042 620 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 IMPG1Q17R60 797 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 FAM102AQ5T9C2 384 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 BBS5Q8N3I7 341 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ENDOVQ8N8Q3 282 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SLC4A5Q9BY07 1137 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KIAA1586Q9HCI6 787 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PI4KBQ9UBF8 816 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 LGALS13Q9UHV8 139 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ASAP1Q9ULH1 1129 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KDM6AO15550 1401 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UBDO15205 165 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 MTSS1O43312 755 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 EDF1O60869 148 aaKnown RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 TPBGLP0DKB5 382 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SQLEQ14534 574 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 DGCR6LQ9BY27 220 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 RNF38Q9H0F5 515 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CCSER2Q9H7U1 834 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UGT1A9O60656 530 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 POLBP06746 335 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 MYBP10242 640 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 VCLP18206 1134 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UGT1A6P19224 532 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UGT1A1P22309 533 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UGT1A4P22310 534 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UGT1A3P35503 534 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UGT1A5P35504 534 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ABCB5Q2M3G0 1257 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 C5orf22Q49AR2 442 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 GPR107Q5VW38 600 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CENPPQ6IPU0 288 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 NMUR2Q9GZQ4 415 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 POLR3FQ9H1D9 316 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 CPVLQ9H3G5 476 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UGT1A7Q9HAW7 530 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UGT1A10Q9HAW8 530 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 UGT1A8Q9HAW9 530 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 COMMD8Q9NX08 183 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 KCND2Q9NZV8 630 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PCDHB2Q9Y5E7 798 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms