RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 RWDD2AQ9UIY3 292 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 BLOC1S6Q9UL45 172 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 MYMKA6NI61 221 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 UBTFL6P0CB48 400 aaPredicted RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 MTAPQ13126 283 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 ELOAQ14241 798 aaKnown RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 PMF1Q6P1K2 205 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 SSH2Q76I76 1423 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 SMPDL3BQ92485 455 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 MLPHQ9BV36 600 aaPredicted RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 VIPAS39Q9H9C1 493 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 F5H6K3 240 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 PODXLO00592 558 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 MGRN1O60291 552 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 ALAS2P22557 587 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 GLRBP48167 497 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 NPEPPSP55786 919 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 BTN3A2P78410 334 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 RBP5P82980 135 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 KLRC3Q07444 240 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 DHX34Q14147 1143 aaKnown RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 PLA2G4FQ68DD2 849 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 NFRKBQ6P4R8 1299 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 CAMK1DQ8IU85 385 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 ATG16L2Q8NAA4 619 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 RNF121Q9H920 327 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 TBC1D22BQ9NU19 505 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 EMSYQ7Z589 1322 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 SLC12A8A0AV02 714 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 FAM220BPB1ANY3 271 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 NR5A2O00482 541 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 WEE2P0C1S8 567 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 PPP2R1BP30154 601 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 PRCPP42785 496 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 COPZ1P61923 177 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 MC1RQ01726 317 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 CYLC2Q14093 348 aaPredicted RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 EZH2Q15910 746 aaKnown RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 USP41Q3LFD5 358 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 GRIN3AQ8TCU5 1115 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 SLC4A5Q9BY07 1137 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 CERS4Q9HA82 394 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 ZMYM5Q9UJ78 669 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 SAC3D1A6NKF1 404 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 TSPAN1O60635 241 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 KPNA6O60684 536 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 ADSLP30566 484 aaPredicted RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 SARSP49591 514 aaKnown RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 TMED10P49755 219 aaKnown RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 DLG1Q12959 904 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 DRAP1Q14919 205 aaPredicted RBP10.04□□□□□ -0.8
CHD3-202ENST00000358181 PTPN20Q4JDL3 420 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 FATE1Q969F0 183 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 SYT15Q9BQS2 421 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 MKNK1Q9BUB5 465 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 CLPBQ9H078 707 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 PHF11Q9UIL8 331 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 PCDHA11Q9Y5I1 949 aa10.04□□□□□ -0.8
CHD3-202ENST00000358181 ERBB4Q15303 1308 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 PHLPP2Q6ZVD8 1323 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 BHMG1C9JSJ3 638 aaPredicted RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 H2AFXP16104 143 aaPredicted RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 DMPKQ09013 629 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 BTG3Q14201 252 aaPredicted RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 C15orf59Q2T9L4 293 aaPredicted RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 TOP1MTQ969P6 601 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 LY9Q9HBG7 655 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.03□□□□□ -0.82e-8■■■■□ 21
CHD3-202ENST00000358181 ABHD14A-ACY1A0A1B0GW23 586 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 SMCO3A2RU48 225 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 KPNA3O00505 521 aaPredicted RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 PSMA4P25789 261 aaKnown RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 PTK6Q13882 451 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 CRYMQ14894 314 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 RBBP8NLQ8NC74 664 aaPredicted RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 KBTBD7Q8WVZ9 684 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 GPR108Q9NPR9 543 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 PLA2G6O60733 806 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 CCDC22O60826 627 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 HSD3B1P14060 373 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 ATP6V1B1P15313 513 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 RPL9P32969 192 aaKnown RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 ATXN1P54253 815 aaKnown RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 PLD1Q13393 1074 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 LAMB3Q13751 1172 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 LINC00116Q8NCU8 138 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 SPPL2AQ8TCT8 520 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 GPER1Q99527 375 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 LRRC4BQ9NT99 713 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 CHORDC1Q9UHD1 332 aaPredicted RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 MROH7-TTC4A0A0A0MT08 1334 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 CD4P01730 458 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 AMHP03971 560 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 PCP11498 1178 aaKnown RBP10.03□□□□□ -0.8
CHD3-202ENST00000358181 NCK1P16333 377 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 HNF4AP41235 474 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 CCT8P50990 548 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 BNC1Q01954 994 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 KYAT1Q16773 422 aa10.03□□□□□ -0.8
CHD3-202ENST00000358181 QRICH1Q2TAL8 776 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms