RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PAN2Q504Q3 1202 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 SLC24A5Q71RS6 500 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 RBBP8NLQ8NC74 664 aaPredicted RBP13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 SMYD3Q9H7B4 428 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 FETUBQ9UGM5 382 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 SLC24A2Q9UI40 661 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 ITGA11Q9UKX5 1188 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 TBX21Q9UL17 535 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 TRIM43BA6NCK2 446 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 C9IYK1 514 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 HGSO14964 777 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 SPAG7O75391 227 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 CYP1A1P04798 512 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 THP07101 528 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 ASPAP45381 313 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 RBP5P82980 135 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 SLC1A5Q15758 541 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 OTOAQ7RTW8 1153 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 RHOT1Q8IXI2 618 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 ZNF276Q8N554 614 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 EXD1Q8NHP7 514 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 LRRC8CQ8TDW0 803 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 SEPT8Q92599 483 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 TRIM43Q96BQ3 446 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 OSBPL8Q9BZF1 889 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 NIF3L1Q9GZT8 377 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 ENPP3O14638 875 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 ALOX15BO15296 676 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 UPP2O95045 317 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 KCNE1P15382 129 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 RPA3P35244 121 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 GATMP50440 423 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 RAB27AP51159 221 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 CLCNKBP51801 687 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 RNASELQ05823 741 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 ADCY1Q08828 1119 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 XKR4Q5GH76 650 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 C1orf53Q5VUE5 145 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 IRGCQ6NXR0 463 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 C4orf50Q6ZRC1 276 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 MRPL10Q7Z7H8 261 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 HASPINQ8TF76 798 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 DNAJC9Q8WXX5 260 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 PPP1R10Q96QC0 940 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 SMC6Q96SB8 1091 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 YIPF3Q9GZM5 350 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 SDCBP2Q9H190 292 aa13.19□□□□□ -0.3
RTFDC1-202ENST00000357348 ZNF623O75123 536 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 CSF2RAP15509 400 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 VPS41P49754 854 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 TSNAXIP1Q2TAA8 658 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 P3H1Q32P28 736 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 EFHC2Q5JST6 749 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 MON1BQ7L1V2 547 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 NLRP9Q7RTR0 991 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 TMCO2Q7Z6W1 182 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 NT5DC4Q86YG4 428 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 ZNF75CPQ92670 426 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 PGBD4Q96DM1 585 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 IFT43Q96FT9 208 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 MIPEPQ99797 713 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 TUBB6Q9BUF5 446 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 PHACTR1Q9C0D0 580 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 CISHQ9NSE2 258 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 KANSL3Q9P2N6 904 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 GIT1Q9Y2X7 761 aa13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 RANBP2P49792 3224 aaKnown RBP13.18□□□□□ -0.3
RTFDC1-202ENST00000357348 LRRD1A4D1F6 860 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 SPTLC1O15269 473 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 LIASO43766 372 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 CBX6O95503 412 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 ACRP10323 421 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 RAG1P15918 1043 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 ACO1P21399 889 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 TAS2R40P59535 323 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 OCRLQ01968 901 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 KLC1Q07866 573 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 TAF1BQ53T94 588 aaPredicted RBP13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 DPH6Q7L8W6 267 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 CLNKQ7Z7G1 428 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 ZNF598Q86UK7 904 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 PAIP2Q9BPZ3 127 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 SYT15Q9BQS2 421 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 FTHL17Q9BXU8 183 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 STOML1Q9UBI4 398 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 HMGXB4Q9UGU5 601 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 ZFP69BQ9UJL9 534 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 DERAQ9Y315 318 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 TTC3P53804 2025 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 F8W810 466 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 ZWINTO95229 277 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 NEFHP12036 1026 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms