RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PDCD4Q53EL6 469 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 CIAPIN1Q6FI81 312 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 KLHL35Q6PF15 583 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 NUDCD3Q8IVD9 361 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 TMEM130Q8N3G9 435 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF276Q8N554 614 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SAMD3Q8N6K7 520 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SLC35B2Q8TB61 432 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF398Q8TD17 642 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 FAM151AQ8WW52 585 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 PYDC1Q8WXC3 89 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 USP6NLQ92738 828 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SKA1Q96BD8 255 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 MTBPQ96DY7 904 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 WNK4Q96J92 1243 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 CAMKK2Q96RR4 588 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 HNRNPABQ99729 332 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 ECSITQ9BQ95 431 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 NTPCRQ9BSD7 190 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 APOL6Q9BWW8 343 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 UGT1A7Q9HAW7 530 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 UGT1A10Q9HAW8 530 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 UGT1A8Q9HAW9 530 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 JPH1Q9HDC5 661 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 DDX56Q9NY93 547 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 FARP1Q9Y4F1 1045 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 FOCADQ5VW36 1801 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 DCAF8L1A6NGE4 600 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 TTLL13PA6NNM8 815 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 PRR5-ARHGAP8B1AHC4 643 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 ADCY3O60266 1144 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 PSAPP07602 524 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 GSTT2P0CG29 244 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 GSTT2BP0CG30 244 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SRGAP2CP0DJJ0 459 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 RARBP10826 455 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 EMP3P54852 163 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 CDH6P55285 790 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 CDH8P55286 799 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 ARHGAP8P85298 464 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 DPYSL3Q14195 570 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 PRKD1Q15139 912 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 BSPRYQ5W0U4 402 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 DRICH1Q6PGQ1 229 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SLC2A7Q6PXP3 512 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 THNSL1Q8IYQ7 743 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 KIAA0319LQ8IZA0 1049 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 GSTCDQ8NEC7 633 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SHKBP1Q8TBC3 707 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SLC26A7Q8TE54 656 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 PRPF31Q8WWY3 499 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SLC7A3Q8WY07 619 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 E2F7Q96AV8 911 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 MRIQ9BWK5 157 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 EPB41L1Q9H4G0 881 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 FADS3Q9Y5Q0 445 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 LOC100653049A0A140TA62 436 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 CXorf49A8MYA2 514 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 EIF3FO00303 357 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 PLSCR1O15162 318 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 KCNN4O15554 427 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 KRT34O76011 436 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 KDELR1P24390 212 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 ACTR2P61160 394 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 SLC25A3Q00325 362 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 MAP3K10Q02779 954 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 INAQ16352 499 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 PTPN20Q4JDL3 420 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF362Q5T0B9 420 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 DENND1BQ6P3S1 775 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 ACAD11Q709F0 780 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 NDUFAF2Q8N183 169 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 CASP10Q92851 521 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 EBF4Q9BQW3 602 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 PPCSQ9HAB8 311 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 RNF146Q9NTX7 359 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 PIH1D1Q9NWS0 290 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 ARHGAP28Q9P2N2 729 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZC3H7BQ9UGR2 993 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 FAF1Q9UNN5 650 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 A0A0B4J269 797 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 KANSL1LA0AUZ9 987 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 SPDYE16A6NNV3 312 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 KRT37O76014 449 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 STK10O94804 968 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 ALDH2P05091 517 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 KRT7P08729 469 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 ANPEPP15144 967 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 SERPINB6P35237 376 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 TMED10P49755 219 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 AP2B1P63010 937 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 ROR1Q01973 937 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 MED21Q13503 144 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 SMUG1Q53HV7 270 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 HSP90AA5PQ58FG0 334 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 SH3PXD2AQ5TCZ1 1133 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 CASC4Q6P4E1 433 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 RBM44Q6ZP01 1051 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 NIPA1Q7RTP0 329 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms