RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 TEKT2Q9UIF3 430 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 GGA1Q9UJY5 639 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 H7C0C1 242 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 EML1O00423 815 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 ALOX15BO15296 676 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 ATP5OP48047 213 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 MRPL28Q13084 256 aaKnown RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 GRB10Q13322 594 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 PDSS2Q86YH6 399 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 UNC5BQ8IZJ1 945 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 C10orf82Q8WW14 230 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 TAMM41Q96BW9 452 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 SUCOQ9UBS9 1254 aaKnown RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 PAPPAQ13219 1627 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 TRIM49D1C9J1S8 452 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 USP1O94782 785 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 BGNP21810 368 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 KRT20P35900 424 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 ARL13BQ3SXY8 428 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 EFHC2Q5JST6 749 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 SCARA3Q6AZY7 606 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 TRAF7Q6Q0C0 670 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 GPD1LQ8N335 351 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 HSPBAP1Q96EW2 488 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CPNE1Q99829 537 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 RPAP3Q9H6T3 665 aaPredicted RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 LRRC4BQ9NT99 713 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 STMN3Q9NZ72 180 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 ADA2Q9NZK5 511 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 HESX1Q9UBX0 185 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 NDUFB5O43674 189 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CCNT2O60583 730 aaKnown RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CAPN1P07384 714 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CSNK2BP67870 215 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CACNB1Q02641 598 aaPredicted RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 ANGEL2Q5VTE6 544 aaKnown RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CCDC103Q8IW40 242 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 MARVELD2Q8N4S9 558 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 C19orf60Q96EN9 201 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 GPATCH1Q9BRR8 931 aaKnown RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 FAM8A1Q9UBU6 413 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 VPS28Q9UK41 221 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 SF3B1O75533 1304 aaKnown RBP eCLIP6.77□□□□□ -1.335e-6■■■■■ 74.6
TRIM38-201ENST00000357085 APOC4-APOC2K7ER74 178 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 APOC2P02655 101 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 ALBP02768 609 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 P4HBP07237 508 aaKnown RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 DDX5P17844 614 aaKnown RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 HALP42357 657 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 KCNJ1P48048 391 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 ITGADQ13349 1161 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 TTBK2Q6IQ55 1244 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 TAF2Q6P1X5 1199 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 KLHL35Q6PF15 583 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CDR2LQ86X02 465 aaPredicted RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CAPSLQ8WWF8 208 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 TUBGCP3Q96CW5 907 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 HSPBP1Q9NZL4 362 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 NFASCO94856 1347 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CYP3A7-CYP3A51PA0A087WV96 503 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CYP3A7P24462 503 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 BCAMP50895 628 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 ZBED5Q49AG3 693 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 C6orf52Q5T4I8 152 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 FAM71AQ8IYT1 594 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 ACTRT2Q8TDY3 377 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 SEPT1Q8WYJ6 367 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 TEX12Q9BXU0 123 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 STK39Q9UEW8 545 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 GNPATO15228 680 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 BMP10O95393 424 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CCNA2P20248 432 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 GARTP22102 1010 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 MAGEA10P43363 369 aaPredicted RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 CASP7P55210 303 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 MOGSQ13724 837 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 HNRNPDQ14103 355 aaKnown RBP6.77□□□□□ -1.33
TRIM38-201ENST00000357085 C6orf183Q5T699 404 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 C12orf60Q5U649 245 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 PADI6Q6TGC4 694 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 VSTM1Q6UX27 236 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 STRA8Q7Z7C7 330 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 SEPT8Q92599 483 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 REEP2Q9BRK0 252 aa6.77□□□□□ -1.33
TRIM38-201ENST00000357085 SDR42E2A6NKP2 422 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 TSPAN9O75954 239 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 C8BP07358 591 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 PGAM1P18669 254 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 PEX2P28328 305 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 CCR3P51677 355 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 RAD23AP54725 363 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 ACAD10Q6JQN1 1059 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 NOP9Q86U38 636 aaKnown RBP6.76□□□□□ -1.33
TRIM38-201ENST00000357085 C11orf74Q86VG3 221 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 CNTD1Q8N815 330 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 RBM15BQ8NDT2 890 aaKnown RBP6.76□□□□□ -1.33
TRIM38-201ENST00000357085 OSGEPQ9NPF4 335 aa6.76□□□□□ -1.33
TRIM38-201ENST00000357085 XPO7Q9UIA9 1087 aaKnown RBP6.76□□□□□ -1.33
TRIM38-201ENST00000357085 TELO2Q9Y4R8 837 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms