RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 CYTH2Q99418 400 aa15.84■□□□□ 0.13
PTBP1-203ENST00000356948 EBF4Q9BQW3 602 aa15.84■□□□□ 0.13
PTBP1-203ENST00000356948 PCMTD2Q9NV79 361 aa15.84■□□□□ 0.13
PTBP1-203ENST00000356948 RBPJLQ9UBG7 517 aa15.84■□□□□ 0.13
PTBP1-203ENST00000356948 CACNG4Q9UBN1 327 aa15.84■□□□□ 0.13
PTBP1-203ENST00000356948 ALDH3A1P30838 453 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 ARFIP2P53365 341 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 ZBTB16Q05516 673 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 LRRC23Q53EV4 343 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-203ENST00000356948 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-203ENST00000356948 SNRNP25Q9BV90 132 aaKnown RBP15.83■□□□□ 0.12
PTBP1-203ENST00000356948 SHCBP1LQ9BZQ2 653 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 LYPLA1O75608 230 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-203ENST00000356948 DCTN3O75935 186 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 SORBS2O94875 1100 aaKnown RBP15.83■□□□□ 0.12
PTBP1-203ENST00000356948 LUC7L3O95232 432 aaKnown RBP15.83■□□□□ 0.12
PTBP1-203ENST00000356948 CYP2C8P10632 490 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 CD1EP15812 388 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 SERPINB4P48594 390 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 PRKD1Q15139 912 aaPredicted RBP15.83■□□□□ 0.12
PTBP1-203ENST00000356948 ACSBG2Q5FVE4 666 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 HACE1Q8IYU2 909 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 ZC3H7BQ9UGR2 993 aaKnown RBP15.83■□□□□ 0.12
PTBP1-203ENST00000356948 SNX9Q9Y5X1 595 aa15.83■□□□□ 0.12
PTBP1-203ENST00000356948 DPPA5A6NC42 116 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 PRPSAP2O60256 369 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 C22orf31O95567 290 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 CALB2P22676 271 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 TSNAXIP1Q2TAA8 658 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 ZNF534Q76KX8 674 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 ARID3BQ8IVW6 561 aaPredicted RBP15.82■□□□□ 0.12
PTBP1-203ENST00000356948 B4GALNT2Q8NHY0 566 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 PIDD1Q9HB75 910 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 POPDC2Q9HBU9 364 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 ARHGEF4Q9NR80 690 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 TAS2R1Q9NYW7 299 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 GPRC5DQ9NZD1 345 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 IKBKGQ9Y6K9 419 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 WASF2Q9Y6W5 498 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 AMPD1P23109 780 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 ABCG1P45844 678 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 TAP1Q03518 808 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 BST1Q10588 318 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 RCN2Q14257 317 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 CTU1Q7Z7A3 348 aaKnown RBP15.82■□□□□ 0.12
PTBP1-203ENST00000356948 SLC25A41Q8N5S1 370 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 PTCD3Q96EY7 689 aaKnown RBP15.82■□□□□ 0.12
PTBP1-203ENST00000356948 APOL6Q9BWW8 343 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 VPS33BQ9H267 617 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 CDHR5Q9HBB8 845 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 PCDH18Q9HCL0 1135 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 SKIV2L2P42285 1042 aaKnown RBP15.82■□□□□ 0.12
PTBP1-203ENST00000356948 HDAC4P56524 1084 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 KDSRQ06136 332 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 KLHL38Q2WGJ6 581 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 SLC45A4Q5BKX6 768 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 UNC5AQ6ZN44 842 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 PCGF5Q86SE9 256 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.82■□□□□ 0.12
PTBP1-203ENST00000356948 STK32AQ8WU08 396 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 SENP1Q9P0U3 644 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 TUBGCP4Q9UGJ1 667 aa15.82■□□□□ 0.12
PTBP1-203ENST00000356948 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.81■□□□□ 0.12
PTBP1-203ENST00000356948 PAPSS1O43252 624 aaPredicted RBP15.81■□□□□ 0.12
PTBP1-203ENST00000356948 RFPL1O75677 317 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 ENO1P06733 434 aaKnown RBP15.81■□□□□ 0.12
PTBP1-203ENST00000356948 CCDC130P13994 396 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 AP3M2P53677 418 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 BCAR1P56945 870 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 FYB2Q5VWT5 728 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 CCDC62Q6P9F0 684 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 UCMAQ8WVF2 138 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 LGMNQ99538 433 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 CNTN3Q9P232 1028 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 SLC15A5A6NIM6 579 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 MEI4A8MW99 385 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 MED7O43513 233 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 NPTXRO95502 500 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 DHRS4L1P0CG22 281 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 LMO2P25791 158 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 PEX6Q13608 980 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 KIZQ2M2Z5 673 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 C4orf50Q6ZRC1 276 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 CCDC185Q8N715 623 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 EFCAB3Q8N7B9 438 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 TRIM55Q9BYV6 548 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 RSAD1Q9HA92 442 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 GOLGA2P5Q9HBQ8 144 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 FCHO1O14526 889 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 GSC2O15499 205 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 HAUS5O94927 633 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 LCP1P13796 627 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 PTPN4P29074 926 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 ADORA2BP29275 332 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 GRIK3Q13003 919 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 UBAP2LQ14157 1087 aaKnown RBP15.81■□□□□ 0.12
PTBP1-203ENST00000356948 CHI3L2Q15782 390 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 PARP6Q2NL67 630 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 SULF1Q8IWU6 871 aa15.81■□□□□ 0.12
PTBP1-203ENST00000356948 FNIP1Q8TF40 1166 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms