RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.6□□□□□ -0.39
SIRPA-201ENST00000356025 DEFB106AQ8N104 65 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 ARFGAP1Q8N6T3 406 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 APPL2Q8NEU8 664 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 E2F7Q96AV8 911 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 RNF157Q96PX1 679 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 TNFSF13BQ9Y275 285 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 CILPO75339 1184 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 LYPLA1O75608 230 aaPredicted RBP12.6□□□□□ -0.39
SIRPA-201ENST00000356025 STIP1P31948 543 aaKnown RBP12.6□□□□□ -0.39
SIRPA-201ENST00000356025 SNX16P57768 344 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 LAMC2Q13753 1193 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 BOLA3Q53S33 107 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 GPC2Q8N158 579 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 MPP5Q8N3R9 675 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 PTPRN2Q92932 1015 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 PDZD7Q9H5P4 517 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 GRID1Q9ULK0 1009 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 PDHXO00330 501 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 MGRN1O60291 552 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 ZWINTO95229 277 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 ASMTLO95671 621 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 ERVK-10P10266 1014 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 MGAT1P26572 445 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 AVPR1AP37288 418 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 ZNF143P52747 638 aaPredicted RBP12.6□□□□□ -0.39
SIRPA-201ENST00000356025 PGGT1BP53609 377 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 THOC5Q13769 683 aaKnown RBP12.6□□□□□ -0.39
SIRPA-201ENST00000356025 TSNAXIP1Q2TAA8 658 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 ILDR2Q71H61 639 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 FASTKD5Q7L8L6 764 aaKnown RBP12.6□□□□□ -0.39
SIRPA-201ENST00000356025 FAM136AQ96C01 138 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 ATXN3LQ9H3M9 355 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 CDHR5Q9HBB8 845 aa12.6□□□□□ -0.39
SIRPA-201ENST00000356025 ADARB2Q9NS39 739 aaKnown RBP12.6□□□□□ -0.39
SIRPA-201ENST00000356025 TP73O15350 636 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 ZMPSTE24O75844 475 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 DGKIO75912 1065 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 NCAM1P13591 858 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 MGAT5Q09328 741 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 OASLQ15646 514 aaKnown RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 ZRSR2Q15696 482 aaKnown RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 RIBC1Q8N443 379 aaPredicted RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 PLD5Q8N7P1 536 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 ZNF669Q96BR6 464 aaPredicted RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 ZFP42Q96MM3 310 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 TMEM109Q9BVC6 243 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 SPATS2LQ9NUQ6 558 aaKnown RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 DRG1Q9Y295 367 aaKnown RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 RPS6KL1Q9Y6S9 549 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 MYH9P35579 1960 aaKnown RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 GOLGA8QA0A0J9YX86 632 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 GOLGA8OA6NCC3 632 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 GOLGA8NF8WBI6 632 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 FZD9O00144 591 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 DFFAO00273 331 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 EDF1O60869 148 aaKnown RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 UNC5CO95185 931 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 CSPG5O95196 566 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 GPD2P43304 727 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 NDUFV1P49821 464 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 RCN1Q15293 331 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 PDK4Q16654 411 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 GEN1Q17RS7 908 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 TSHZ1Q6ZSZ6 1077 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 RASSF3Q86WH2 238 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 SCN4BQ8IWT1 228 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 LMNTD2Q8IXW0 634 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 CCNYL1Q8N7R7 359 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 MCUQ8NE86 351 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 EXT2Q93063 718 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 PRR11Q96HE9 360 aaPredicted RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 SLC24A2Q9UI40 661 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 MAGEB2O15479 319 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 C6orf222P0C671 652 aaPredicted RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 DEUP1Q05D60 604 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 BNIP1Q12981 228 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 STX3Q13277 289 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 SNAPC2Q13487 334 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 TARBP2Q15633 366 aaKnown RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 ANKRD20A2Q5SQ80 823 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 ANKRD20A1Q5TYW2 823 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 C1orf146Q5VVC0 180 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 BZW1Q7L1Q6 419 aaKnown RBP12.59□□□□□ -0.39
SIRPA-201ENST00000356025 SLC26A11Q86WA9 606 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 SLC35B2Q8TB61 432 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 CLPTM1LQ96KA5 538 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 ETNK2Q9NVF9 386 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 ARL8BQ9NVJ2 186 aa12.59□□□□□ -0.39
SIRPA-201ENST00000356025 ANKRD31Q8N7Z5 1873 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 COL4A5P29400 1685 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 CASTOR2A6NHX0 329 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 ICAM3P32942 547 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 MAP3K10Q02779 954 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 SLC25A11Q02978 314 aaKnown RBP12.58□□□□□ -0.4
SIRPA-201ENST00000356025 LACTB2Q53H82 288 aaPredicted RBP12.58□□□□□ -0.4
SIRPA-201ENST00000356025 CDKL3Q8IVW4 592 aaPredicted RBP12.58□□□□□ -0.4
SIRPA-201ENST00000356025 COLGALT1Q8NBJ5 622 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 FOXP3Q9BZS1 431 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms