RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 STAT5AP42229 794 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 PURAQ00577 322 aaKnown RBP11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 NAPEPLDQ6IQ20 393 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 TMC5Q6UXY8 1006 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 GRAMD1CQ8IYS0 662 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 HDDC3Q8N4P3 179 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 ZNF335Q9H4Z2 1342 aaPredicted RBP11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 SCN2BO60939 215 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 HPCAL1P37235 193 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 SFR1Q86XK3 245 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 SPPL2AQ8TCT8 520 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 TMEM143Q96AN5 459 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 REPS1Q96D71 796 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 VPS45Q9NRW7 570 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 CDY2AQ9Y6F7 541 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 CDY1Q9Y6F8 540 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 TMEM114B3SHH9 223 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 HOXB7P09629 217 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 EPHB2P29323 1055 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 OMPP47874 163 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 KCNJ5P48544 419 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 NME5P56597 212 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 SRP54P61011 504 aaKnown RBP11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 ZBED6P86452 979 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 CARTPTQ16568 116 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 PDCD4Q53EL6 469 aaKnown RBP11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 TRAPPC5Q8IUR0 188 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 SAMD3Q8N6K7 520 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 PROX1Q92786 737 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 KCNK16Q96T55 309 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 MCUBQ9NWR8 336 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 KLK14Q9P0G3 267 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 H3BNH8 94 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 FDX1P10109 184 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 ITIH2P19823 946 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 GPR15P49685 360 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 ACOT2P49753 483 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 BOP1Q14137 746 aaKnown RBP11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 LRRC14Q15048 493 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 EFHC1Q5JVL4 640 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 RP9Q8TA86 221 aaKnown RBP11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 PDGFCQ9NRA1 345 aa11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 UBA2Q9UBT2 640 aaPredicted RBP11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 ZNF214Q9UL59 606 aaPredicted RBP11.83□□□□□ -0.52
NUDCD3-202ENST00000355451 TRPC5OSA6NMA1 111 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 PPM1AP35813 382 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ZNF200P98182 395 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 EXOSC10Q01780 885 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 PPP1R15BQ5SWA1 713 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 DNAAF1Q8NEP3 725 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 SH3RF3Q8TEJ3 882 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 TBATAQ96M53 351 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 FANCFQ9NPI8 374 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 PCDHA7Q9UN72 937 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 URB2Q14146 1524 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 IGSF9BQ9UPX0 1349 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 SUPT7LO94864 414 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ITGB6P18564 788 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 PTGER2P43116 358 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ATP6V1C2Q8NEY4 427 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 HCAR2Q8TDS4 363 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 TNKS2Q9H2K2 1166 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ACTR8Q9H981 624 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 TMEM63CQ9P1W3 806 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ZFYVE9O95405 1425 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 MYL12BO14950 172 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 DBIP07108 87 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 HTR1BP28222 390 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 PIGHQ14442 188 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 CRYMQ14894 314 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 KBTBD7Q8WVZ9 684 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 HCN3Q9P1Z3 774 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 SHOC2Q9UQ13 582 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 SLC33A1O00400 549 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 TPST1O60507 370 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 TSPAN19P0C672 248 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ALDH3A2P51648 485 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 P4HA3Q7Z4N8 544 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ZNF786Q8N393 782 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ZNF563Q8TA94 476 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 HASPINQ8TF76 798 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 EMSYQ7Z589 1322 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 FAM92AA1XBS5 289 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 DYTNA2CJ06 578 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 MAFKO60675 156 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 NDUFA10O95299 355 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ITPKBP27987 946 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 IL12RB1P42701 662 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 GDI2P50395 445 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 SERPINB9P50453 376 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 DRAP1Q14919 205 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 UBE3CQ15386 1083 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 PFKFB3Q16875 520 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 TTC39BQ5VTQ0 682 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 GTF2IRD2BQ6EKJ0 949 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 NFRKBQ6P4R8 1299 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 ATG9AQ7Z3C6 839 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 GTF2IRD2Q86UP8 949 aa11.82□□□□□ -0.52
NUDCD3-202ENST00000355451 HTATIP2Q9BUP3 242 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms