RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TRIB1Q96RU8 372 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 FAM129AQ9BZQ8 928 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 HELLSQ9NRZ9 838 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 MOCS1Q9NZB8 636 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 DERAQ9Y315 318 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 SYNJ1O43426 1573 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 EYSQ5T1H1 3165 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 MYO15AQ9UKN7 3530 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 A8MV72 311 aaPredicted RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 TNPO2O14787 897 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 TNFSF14O43557 240 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 HSPA4LO95757 839 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 F9P00740 461 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 VSIG10L2P0DP72 767 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 RAC2P15153 192 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 TGM1P22735 817 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 EPHA8P29322 1005 aaPredicted RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 PGM1P36871 562 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 RPS3AP61247 264 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 RPP30P78346 268 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 MC1RQ01726 317 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 EIF2B5Q13144 721 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 PLCB4Q15147 1175 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 IKBIPQ70UQ0 350 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ANKRD23Q86SG2 305 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 LILRA2Q8N149 483 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 C17orf53Q8N3J3 647 aaPredicted RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 NGEFQ8N5V2 710 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 LINC00482Q8N8I6 264 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 KCTD6Q8NC69 237 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ABHD1Q96SE0 405 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 NDST4Q9H3R1 872 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 SLC32A1Q9H598 525 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 MKLN1Q9UL63 735 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ANGEL1Q9UNK9 670 aaKnown RBP1.82□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF711Q9Y462 761 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 YEATS2Q9ULM3 1422 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 GAPVD1Q14C86 1478 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 RUSC2Q8N2Y8 1516 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 NRXN3Q9Y4C0 1643 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 FRMPD1Q5SYB0 1578 aa1.82□□□□□ -2.12
BRCA1-202ENST00000354071 B4DLN1 442 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 LDLRAD4O15165 306 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 HNRNPRO43390 633 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 BEST1O76090 585 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CLRN1P58418 232 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 HSD11B2P80365 405 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CEBPZQ03701 1054 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 PRICKLE4Q2TBC4 344 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 TRIM60Q495X7 471 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 FBXO43Q4G163 708 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 BMP2KLQ5H9B9 411 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 HIST2H2BCQ6DN03 193 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 HIST2H2BDQ6DRA6 164 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 NAPEPLDQ6IQ20 393 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ATF7IPQ6VMQ6 1270 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 TMTC3Q6ZXV5 915 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 PDSS2Q86YH6 399 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 GALNT13Q8IUC8 556 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 LSM14AQ8ND56 463 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ADAMTS15Q8TE58 950 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SCAMP4Q969E2 229 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 WDYHV1Q96HA8 205 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 WDR24Q96S15 920 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 MCOLN1Q9GZU1 580 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 OR10A2Q9H208 303 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CCDC134Q9H6E4 229 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SEMA4BQ9NPR2 832 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 TMOD4Q9NZQ9 345 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 RIMKLBQ9ULI2 386 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 C19orf53Q9UNZ5 99 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SLC27A6Q9Y2P4 619 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CEP170BQ9Y4F5 1589 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SCAF11Q99590 1463 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 DRGXA6NNA5 263 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 TBKBP1A7MCY6 615 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 BTBD18B2RXH4 712 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 PTGES3LE9PB15 166 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 HOXA3O43365 443 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SUN1O94901 812 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CNPP09543 421 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 UBL4AP11441 157 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 PGDP52209 483 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 DGKEP52429 567 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CREB5Q02930 508 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 RIN1Q13671 783 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ATP1A4Q13733 1029 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SSPNQ14714 243 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 IQCB1Q15051 598 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ATXN7L2Q5T6C5 722 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 KIAA1614Q5VZ46 1190 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ZKSCAN2Q63HK3 967 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SLC30A6Q6NXT4 461 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 DPP8Q6V1X1 898 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 PRR23BQ6ZRT6 265 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 RAB11FIP2Q7L804 512 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CXXC5Q7LFL8 322 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 RNF144BQ7Z419 303 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 VSIG10LQ86VR7 867 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 GAS2L3Q86XJ1 694 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms