RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TMCO5BA8MYB1 307 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 H0Y626 953 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 TULP1O00294 542 aaPredicted RBP8.66□□□□□ -1.02
CD44-205ENST00000352818 MAP3K13O43283 966 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 CEP104O60308 925 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 TRIM16O95361 564 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 C1RP00736 705 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 CYP1A1P04798 512 aaPredicted RBP8.66□□□□□ -1.02
CD44-205ENST00000352818 URODP06132 367 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 KRT5P13647 590 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 RPL17P18621 184 aaKnown RBP8.66□□□□□ -1.02
CD44-205ENST00000352818 ABCB4P21439 1286 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 TMOD1P28289 359 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 AARSP49588 968 aaKnown RBP eCLIP8.66□□□□□ -1.02
CD44-205ENST00000352818 YWHAEP62258 255 aaKnown RBP8.66□□□□□ -1.02
CD44-205ENST00000352818 DSG1Q02413 1049 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 CREB5Q02930 508 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 C1QBPQ07021 282 aaKnown RBP8.66□□□□□ -1.02
CD44-205ENST00000352818 SEMA3BQ13214 749 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 GPS2Q13227 327 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 CASP8Q14790 479 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 PCBP1Q15365 356 aaKnown RBP eCLIP8.66□□□□□ -1.02
CD44-205ENST00000352818 AMHR2Q16671 573 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 DUOXA2Q1HG44 320 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 SLC5A9Q2M3M2 681 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 SGSM1Q2NKQ1 1148 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 ZNF568Q3ZCX4 644 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 TAF3Q5VWG9 929 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 LMBRD2Q68DH5 695 aaPredicted RBP8.66□□□□□ -1.02
CD44-205ENST00000352818 EMBQ6PCB8 327 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 TXNDC11Q6PKC3 985 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 ZNF410Q86VK4 478 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 LSM14AQ8ND56 463 aaKnown RBP8.66□□□□□ -1.02
CD44-205ENST00000352818 OR5B17Q8NGF7 314 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 ZNF564Q8TBZ8 553 aaPredicted RBP8.66□□□□□ -1.02
CD44-205ENST00000352818 CD101Q93033 1021 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 CAVIN3Q969G5 261 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 ZNF653Q96CK0 615 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 VCPIP1Q96JH7 1222 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 ZNF668Q96K58 619 aaPredicted RBP8.66□□□□□ -1.02
CD44-205ENST00000352818 NLRP4Q96MN2 994 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 ZSWIM1Q9BR11 485 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 LRRC1Q9BTT6 524 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 PI4K2AQ9BTU6 479 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 NIF3L1Q9GZT8 377 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 SLITRK6Q9H5Y7 841 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 IFT122Q9HBG6 1241 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 GDF3Q9NR23 364 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 CHST7Q9NS84 486 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.66□□□□□ -1.02
CD44-205ENST00000352818 KCNK4Q9NYG8 393 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 SMARCAL1Q9NZC9 954 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 DKK4Q9UBT3 224 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 DPP7Q9UHL4 492 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 LCMT1Q9UIC8 334 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 INPP5FQ9Y2H2 1132 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 FLNCQ14315 2725 aa8.66□□□□□ -1.02
CD44-205ENST00000352818 SHROOM3Q8TF72 1996 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 CCDC163A0A0D9SF12 145 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 CCDC66A2RUB6 948 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 INO80B-WBP1J3KQ70 363 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 NRP1O14786 923 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 CCL16O15467 120 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 PHACTR2O75167 634 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 LSM8O95777 96 aaKnown RBP8.65□□□□□ -1.02
CD44-205ENST00000352818 TNNC2P02585 160 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 NTRK1P04629 796 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 CTNNA1P35221 906 aaKnown RBP8.65□□□□□ -1.02
CD44-205ENST00000352818 TNFSF9P41273 254 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 SOX9P48436 509 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 NOMO3P69849 1222 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 CBX1P83916 185 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 CDC42EP1Q00587 391 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 MON1BQ7L1V2 547 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 NT5DC4Q86YG4 428 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 PHF13Q86YI8 300 aaPredicted RBP8.65□□□□□ -1.02
CD44-205ENST00000352818 CD302Q8IX05 232 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 IFT20Q8IY31 132 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 MCOLN2Q8IZK6 566 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 UBL4BQ8N7F7 174 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 RBBP8NLQ8NC74 664 aaPredicted RBP8.65□□□□□ -1.02
CD44-205ENST00000352818 ELSPBP1Q96BH3 223 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 MCRS1Q96EZ8 462 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 ANKRD36BP1Q96IX9 119 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 ARID3AQ99856 593 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 TCHPQ9BT92 498 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 NUP85Q9BW27 656 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 INO80BQ9C086 356 aaPredicted RBP8.65□□□□□ -1.02
CD44-205ENST00000352818 MTMR12Q9C0I1 747 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 GOLPH3Q9H4A6 298 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 PDZD7Q9H5P4 517 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 ASB7Q9H672 318 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 MINDY3Q9H8M7 445 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 VRTNQ9H8Y1 702 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 TRPV5Q9NQA5 729 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 CHST12Q9NRB3 414 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 DNMT3BQ9UBC3 853 aaKnown RBP8.65□□□□□ -1.02
CD44-205ENST00000352818 DMGDHQ9UI17 866 aaKnown RBP8.65□□□□□ -1.02
CD44-205ENST00000352818 FBXW11Q9UKB1 542 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 NUB1Q9Y5A7 615 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms