RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 B4GALT3O60512 393 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 AP1G2O75843 785 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 AGTP01019 485 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 POMCP01189 267 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 ZFXP17010 805 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 CAPN2P17655 700 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 CYP2F1P24903 491 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 GRK4P32298 578 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 ACTN2P35609 894 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 MAGEA6P43360 314 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 NDUFV1P49821 464 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 TKTL1P51854 596 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 ATXN1P54253 815 aaKnown RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 CACNA2D1P54289 1103 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 MAP3K7CLP57077 242 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 PITX1P78337 314 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 IFFO1Q0D2I5 559 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 XRCC4Q13426 336 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 AUHQ13825 339 aaKnown RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 KRT81Q14533 505 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 ARHGEF6Q15052 776 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 CLLU1OSQ5K130 101 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 C6orf118Q5T5N4 469 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 PM20D1Q6GTS8 502 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 SCYL2Q6P3W7 929 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 NPNTQ6UXI9 565 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 LRRC31Q6UY01 552 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 HFE2Q6ZVN8 426 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 ZNF771Q7L3S4 317 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 BEND5Q7L4P6 421 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 GPRIN1Q7Z2K8 1008 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 LRRTM3Q86VH5 581 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 METTL23Q86XA0 190 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 PPIL6Q8IXY8 311 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 COLGALT2Q8IYK4 626 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 CCDC185Q8N715 623 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 OR10T2Q8NGX3 314 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 ZNF296Q8WUU4 475 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 RSAD2Q8WXG1 361 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 IRGQQ8WZA9 623 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 CPT1BQ92523 772 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 NDRG1Q92597 394 aaKnown RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 P3H4Q92791 437 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 MYLPFQ96A32 169 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 NTAN1Q96AB6 310 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 PGAP3Q96FM1 320 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 SMARCD1Q96GM5 515 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 SERPINB12Q96P63 405 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 CSPG4P5Q96PW8 444 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 KCTD15Q96SI1 283 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 RBM15Q96T37 977 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 MED10Q9BTT4 135 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 MAK16Q9BXY0 300 aaKnown RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 CAPS2Q9BXY5 557 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 ULBP1Q9BZM6 244 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 ELAC1Q9H777 363 aaKnown RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 C10orf88Q9H8K7 445 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 PNPLA8Q9NP80 782 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 STARD7Q9NQZ5 370 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 TMLHEQ9NVH6 421 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 SAGE1Q9NXZ1 904 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 EURLQ9NYK6 297 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 ZMYND8Q9ULU4 1186 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 PCDHB8Q9UN66 801 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 NOVA2Q9UNW9 492 aaKnown RBP7.2□□□□□ -1.26
TRIM55-203ENST00000350034 AP4E1Q9UPM8 1137 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 MUC3AQ02505 3323 aa7.2□□□□□ -1.26
TRIM55-203ENST00000350034 UNC79Q9P2D8 2635 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 DCDC2CA8MYV0 355 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 I3L4J1 428 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 DGKIO75912 1065 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 DDHD2O94830 711 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 OAZ2O95190 189 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 IFNB1P01574 187 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 ITGB1P05556 798 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 SELPP16109 830 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 RDXP35241 583 aaKnown RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 MDH1P40925 334 aaKnown RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 MAGEA4P43358 317 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 NR2C2P49116 596 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 SULT1E1P49888 294 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 AIF1P55008 147 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 BCAR1P56945 870 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 MAGOHP61326 146 aaKnown RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 PPP2R2AP63151 447 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 GNGT1P63211 74 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 IFI35P80217 286 aaPredicted RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 ROR1Q01973 937 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 SCAPQ12770 1279 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 SLC10A2Q12908 348 aaPredicted RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 SEMA3BQ13214 749 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 EIF4EBP2Q13542 120 aaPredicted RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 KCNJ11Q14654 390 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 STAT4Q14765 748 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 RASA2Q15283 850 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 MAPRE1Q15691 268 aaKnown RBP7.19□□□□□ -1.26
TRIM55-203ENST00000350034 KYNUQ16719 465 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 DCAF6Q58WW2 860 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 NOMO2Q5JPE7 1267 aa7.19□□□□□ -1.26
TRIM55-203ENST00000350034 SYPL2Q5VXT5 272 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms