RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 KCNJ11Q14654 390 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 EFHC2Q5JST6 749 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 CLEC20AQ6ZU45 233 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 CACNA2D3Q8IZS8 1091 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 KLHDC9Q8NEP7 349 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 DYDC1Q8WWB3 177 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 FAM149B1Q96BN6 582 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 SEC16BQ96JE7 1060 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 KCTD15Q96SI1 283 aaPredicted RBP17.35■□□□□ 0.37
SAMM50-201ENST00000350028 SYT15Q9BQS2 421 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 ADAM33Q9BZ11 813 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 MTMR10Q9NXD2 777 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 CDH9Q9ULB4 789 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 STAP1Q9ULZ2 295 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 THSD7BQ9C0I4 1608 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 RASA4BC9J798 803 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 RASA4O43374 803 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 CLUHO75153 1309 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 PAX3P23760 479 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 CST5P28325 142 aaPredicted RBP17.34■□□□□ 0.37
SAMM50-201ENST00000350028 THPOP40225 353 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 CLCNKBP51801 687 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 ATXN1P54253 815 aaKnown RBP17.34■□□□□ 0.37
SAMM50-201ENST00000350028 PRKCZQ05513 592 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 KCNA10Q16322 511 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 KLHL38Q2WGJ6 581 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 BBS9Q3SYG4 887 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 MSS51Q4VC12 460 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 C6orf89Q6UWU4 347 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 ARHGEF18Q6ZSZ5 1173 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 TRABD2AQ86V40 505 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 PALM2Q8IXS6 379 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 SRRM1Q8IYB3 904 aaKnown RBP17.34■□□□□ 0.37
SAMM50-201ENST00000350028 SIX6OS1Q8N1H7 587 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 TAB3Q8N5C8 712 aaPredicted RBP17.34■□□□□ 0.37
SAMM50-201ENST00000350028 FBXO36Q8NEA4 188 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 LPPQ93052 612 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 NT5C3BQ969T7 300 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 NSRP1Q9H0G5 558 aaKnown RBP17.34■□□□□ 0.37
SAMM50-201ENST00000350028 AGO3Q9H9G7 860 aaKnown RBP17.34■□□□□ 0.37
SAMM50-201ENST00000350028 CRTAC1Q9NQ79 661 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 NKIRAS1Q9NYS0 192 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 RABGEF1Q9UJ41 708 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 FZD10Q9ULW2 581 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 PTCH2Q9Y6C5 1203 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 HTTP42858 3142 aa17.34■□□□□ 0.37
SAMM50-201ENST00000350028 BEST1O76090 585 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 ARL4AP40617 200 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 SCNN1GP51170 649 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 GEMIN4P57678 1058 aaKnown RBP17.33■□□□□ 0.37
SAMM50-201ENST00000350028 TRIM32Q13049 653 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 DSC3Q14574 896 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 SLC45A4Q5BKX6 768 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 KIAA0319Q5VV43 1072 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 BZW1Q7L1Q6 419 aaKnown RBP17.33■□□□□ 0.37
SAMM50-201ENST00000350028 BNIPLQ7Z465 357 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 CCDC185Q8N715 623 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 CSPG4P5Q96PW8 444 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 SLC2A13Q96QE2 648 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 NPY6RQ99463 290 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 KLC2Q9H0B6 622 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 RAB6BQ9NRW1 208 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 PSMC3IPQ9P2W1 217 aaPredicted RBP17.33■□□□□ 0.37
SAMM50-201ENST00000350028 PADI3Q9ULW8 664 aa17.33■□□□□ 0.37
SAMM50-201ENST00000350028 BANF1O75531 89 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 IGFBP6P24592 240 aaPredicted RBP17.33■□□□□ 0.36
SAMM50-201ENST00000350028 PCSK1P29120 753 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 MAGEA6P43360 314 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 SLC18A1P54219 525 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 MAP3K7CLP57077 242 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 CAP1Q01518 475 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 DCAF6Q58WW2 860 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 CCSAPQ6IQ19 270 aaPredicted RBP17.33■□□□□ 0.36
SAMM50-201ENST00000350028 CAPN12Q6ZSI9 719 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 C3orf62Q6ZUJ4 267 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 FAM35AQ86V20 835 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 LRRC34Q8IZ02 419 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 OTUD6BQ8N6M0 293 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 ANKRD42Q8N9B4 389 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 PCSK9Q8NBP7 692 aaKnown RBP17.33■□□□□ 0.36
SAMM50-201ENST00000350028 CKAP2Q8WWK9 683 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 PGBD4Q96DM1 585 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 CABS1Q96KC9 395 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 ACSS3Q9H6R3 686 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 KRT82Q9NSB4 513 aa17.33■□□□□ 0.36
SAMM50-201ENST00000350028 HACD1B0YJ81 288 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 SPAG6O75602 509 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 AP1G2O75843 785 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 VIMP08670 466 aaKnown RBP17.32■□□□□ 0.36
SAMM50-201ENST00000350028 SKIP12755 728 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 SSTR1P30872 391 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 CD52P31358 61 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 IFNAR2P48551 515 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 AFF1P51825 1210 aaKnown RBP17.32■□□□□ 0.36
SAMM50-201ENST00000350028 TKTL1P51854 596 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 NRLP54845 237 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 PTK7Q13308 1070 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 PIGWQ7Z7B1 504 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 MGARPQ8TDB4 240 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 NDRG1Q92597 394 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms