RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 KIAA1257Q9ULG3 409 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 ALS2Q96Q42 1657 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 SNED1Q8TER0 1413 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 N4BP2Q86UW6 1770 aaPredicted RBP15.22■□□□□ 0.03
NUP50-201ENST00000347635 PRPF4O43172 522 aaKnown RBP eCLIP15.22■□□□□ 0.034e-7■■■■□ 23.9
NUP50-201ENST00000347635 MSCO60682 206 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 IL10P22301 178 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 GLRA2P23416 452 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.22■□□□□ 0.03
NUP50-201ENST00000347635 ZBTB45Q96K62 511 aaPredicted RBP15.22■□□□□ 0.03
NUP50-201ENST00000347635 MFSD14AQ96MC6 490 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 R3HDM2Q9Y2K5 976 aaKnown RBP15.22■□□□□ 0.03
NUP50-201ENST00000347635 RPS6KL1Q9Y6S9 549 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 ALOX15BO15296 676 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 SLC1A6P48664 564 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 MAPRE1Q15691 268 aaKnown RBP15.22■□□□□ 0.03
NUP50-201ENST00000347635 DPP3Q9NY33 737 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 LGALS13Q9UHV8 139 aa15.22■□□□□ 0.03
NUP50-201ENST00000347635 hCG_1818297A0A087WSY0 165 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 SPDYE5A6NIY4 337 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 H0YGN5 161 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 CABYRO75952 493 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 APOA4P06727 396 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 KBTBD12Q3ZCT8 623 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 PTPRN2Q92932 1015 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 ELMO2Q96JJ3 720 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 MRGBPQ9NV56 204 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 SLC39A10Q9ULF5 831 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 AURKCQ9UQB9 309 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 NFS1Q9Y697 457 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 CCDC78A2IDD5 438 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 NPTXRO95502 500 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 TSHRP16473 764 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 TMCO4Q5TGY1 634 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 OLFML2BQ68BL8 750 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 GRAMD4Q6IC98 578 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 BRSK2Q8IWQ3 736 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 CCDC33Q8N5R6 958 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 MAGEB5Q9BZ81 275 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 IRAK4Q9NWZ3 460 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 C4AP0C0L4 1744 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 A0A1W2PPM1 405 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 ITGB5P18084 799 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 PTGER2P43116 358 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 TAF6P49848 677 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 CYP1B1Q16678 543 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 HIC2Q96JB3 615 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 ING2Q9H160 280 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 PCDHAC2Q9Y5I4 1007 aa15.21■□□□□ 0.03
NUP50-201ENST00000347635 FOXO6A8MYZ6 492 aa15.21■□□□□ 0.02
NUP50-201ENST00000347635 SRP72O76094 671 aaKnown RBP15.21■□□□□ 0.02
NUP50-201ENST00000347635 CYP2C8P10632 490 aa15.21■□□□□ 0.02
NUP50-201ENST00000347635 AXLP30530 894 aa15.21■□□□□ 0.02
NUP50-201ENST00000347635 SNX17Q15036 470 aa15.21■□□□□ 0.02
NUP50-201ENST00000347635 SHROOM1Q2M3G4 852 aaPredicted RBP15.21■□□□□ 0.02
NUP50-201ENST00000347635 N4BP2L1Q5TBK1 243 aaPredicted RBP15.21■□□□□ 0.02
NUP50-201ENST00000347635 BTBD8Q5XKL5 378 aa15.21■□□□□ 0.02
NUP50-201ENST00000347635 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.21■□□□□ 0.02
NUP50-201ENST00000347635 MBOAT7Q96N66 472 aa15.21■□□□□ 0.02
NUP50-201ENST00000347635 FAM237BA0A1B0GVD1 139 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 TRDMT1O14717 391 aaKnown RBP15.2■□□□□ 0.02
NUP50-201ENST00000347635 ATP6V1B1P15313 513 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 TBL3Q12788 808 aaKnown RBP15.2■□□□□ 0.02
NUP50-201ENST00000347635 INPP5AQ14642 412 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 ZNF410Q86VK4 478 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 LCA5Q86VQ0 697 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 REPS2Q8NFH8 660 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 GIPC2Q8TF65 315 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 ACSS3Q9H6R3 686 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 AAASQ9NRG9 546 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 AKAP10O43572 662 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 MIPP30301 263 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 THPOP40225 353 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 CYLC2Q14093 348 aaPredicted RBP15.2■□□□□ 0.02
NUP50-201ENST00000347635 DCAF6Q58WW2 860 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 C4orf50Q6ZRC1 276 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 DEFB107AQ8IZN7 70 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 WNK4Q96J92 1243 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 NAT9Q9BTE0 207 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 CYP3A43Q9HB55 503 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 DMAC2Q9NW81 257 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.2■□□□□ 0.02
NUP50-201ENST00000347635 NOCTQ9UK39 431 aaKnown RBP15.2■□□□□ 0.02
NUP50-201ENST00000347635 POLIQ9UNA4 740 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 KRT36O76013 467 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 RPL22P35268 128 aaKnown RBP15.2■□□□□ 0.02
NUP50-201ENST00000347635 C6orf89Q6UWU4 347 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 BNC2Q6ZN30 1099 aaPredicted RBP15.2■□□□□ 0.02
NUP50-201ENST00000347635 ANKRD23Q86SG2 305 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 DDIASQ8IXT1 998 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 HELQQ8TDG4 1101 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 CCT7Q99832 543 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 LRRC4CQ9HCJ2 640 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 SERPINE1P05121 402 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 CPA3P15088 417 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 CYP2F1P24903 491 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 NET1Q7Z628 596 aaPredicted RBP15.2■□□□□ 0.02
NUP50-201ENST00000347635 MFN1Q8IWA4 741 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms