RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PNPLA1Q8N8W4 532 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 MAGEC3Q8TD91 643 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 SLC44A1Q8WWI5 657 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 TTC17Q96AE7 1141 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 CDCA5Q96FF9 252 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 CLPTM1LQ96KA5 538 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 KCTD15Q96SI1 283 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-201ENST00000347613 EBF4Q9BQW3 602 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 SLC13A1Q9BZW2 595 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 CXorf56Q9H5V9 222 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF358Q9NW07 568 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 KLHL14Q9P2G3 628 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 HEY2Q9UBP5 337 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 MARCOQ9UEW3 520 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-201ENST00000347613 BARX2Q9UMQ3 279 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-201ENST00000347613 ARIH1Q9Y4X5 557 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-201ENST00000347613 SHROOM3Q8TF72 1996 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 APRTP07741 180 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 KITP10721 976 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 YBX3P16989 372 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLCN3-201ENST00000347613 GOT1P17174 413 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 AMPD1P23109 780 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 ARL4CP56559 192 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 SLC18A2Q05940 514 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 MYLKQ15746 1914 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 ZBTB6Q15916 424 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF792Q3KQV3 632 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 BBOF1Q8ND07 529 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 P3H4Q92791 437 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 FAF2Q96CS3 445 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 KIF12Q96FN5 646 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 OXCT2Q9BYC2 517 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-201ENST00000347613 ADAMTS10Q9H324 1103 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 SMARCAD1Q9H4L7 1026 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 MANSC1Q9H8J5 431 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 SLC24A2Q9UI40 661 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 EMCNQ9ULC0 261 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 SNX10Q9Y5X0 201 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 USP3Q9Y6I4 520 aa6.28□□□□□ -1.4
CLCN3-201ENST00000347613 CFAP69A5D8W1 941 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 H7C0C1 242 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 HBP1O60381 514 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 GPR32O75388 356 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 LYPLA1O75608 230 aaPredicted RBP6.27□□□□□ -1.4
CLCN3-201ENST00000347613 KRT7P08729 469 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 LCP1P13796 627 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 ADORA2BP29275 332 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 MAP2K2P36507 400 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 ABCG1P45844 678 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 ATP5OP48047 213 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 AP3M2P53677 418 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 YWHAGP61981 247 aaKnown RBP eCLIP6.27□□□□□ -1.4
CLCN3-201ENST00000347613 ROR1Q01973 937 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 LMNB2Q03252 620 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 TMEM132DQ14C87 1099 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 PPM1JQ5JR12 505 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 SLC9A4Q6AI14 798 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 PPP1R21Q6ZMI0 780 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 PPM1NQ8N819 430 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 LRRC8CQ8TDW0 803 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 NLRP7Q8WX94 980 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 AZIN2Q96A70 460 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 LRRC37BQ96QE4 947 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 NCAPGQ9BPX3 1015 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 APOL6Q9BWW8 343 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 NMUR2Q9GZQ4 415 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 NSRP1Q9H0G5 558 aaKnown RBP6.27□□□□□ -1.4
CLCN3-201ENST00000347613 LRMDAQ9H2I8 198 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 C15orf41Q9Y2V0 281 aa6.27□□□□□ -1.4
CLCN3-201ENST00000347613 DCAF8L1A6NGE4 600 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 SPDYE5A6NIY4 337 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 TRIM49D1C9J1S8 452 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 VDRP11473 427 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 ATP5DP30049 168 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 MAGEA3P43357 314 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 SLC18A1P54219 525 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 MROH9Q5TGP6 573 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 SYPL2Q5VXT5 272 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 NCBP2-AS2Q69YL0 99 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 ALKAL1Q6UXT8 129 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 PAQR9Q6ZVX9 377 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 MAVSQ7Z434 540 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 CROCCP2Q86T23 111 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 OSTM1Q86WC4 334 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 SULF1Q8IWU6 871 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 ADAM32Q8TC27 787 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 ARNTL2Q8WYA1 636 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 SKA1Q96BD8 255 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 ZNF419Q96HQ0 510 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-201ENST00000347613 TTC25Q96NG3 672 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 TBCBQ99426 244 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 OSMRQ99650 979 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 TMEM120AQ9BXJ8 343 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 SLC4A5Q9BY07 1137 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 FAM49AQ9H0Q0 323 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-201ENST00000347613 VRTNQ9H8Y1 702 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 ERAP1Q9NZ08 941 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 FLRT1Q9NZU1 646 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 KCNH4Q9UQ05 1017 aa6.27□□□□□ -1.41
CLCN3-201ENST00000347613 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms