RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ZC3H12AQ5D1E8 599 aaKnown RBP11.44□□□□□ -0.58
ECM1-201ENST00000346569 SDHAF4Q5VUM1 108 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 TPGS2Q68CL5 300 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 KIAA1841Q6NSI8 718 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 FBXO38Q6PIJ6 1188 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 BBS12Q6ZW61 710 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 MON1AQ86VX9 555 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 PSTKQ8IV42 348 aaKnown RBP11.44□□□□□ -0.58
ECM1-201ENST00000346569 HERC6Q8IVU3 1022 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 ZNF461Q8TAF7 563 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 HNRNPLLQ8WVV9 542 aaKnown RBP11.44□□□□□ -0.58
ECM1-201ENST00000346569 C1orf54Q8WWF1 131 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 HSPH1Q92598 858 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 HTATIP2Q9BUP3 242 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 MAGEB5Q9BZ81 275 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 FBXO44Q9H4M3 255 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 RXFP1Q9HBX9 757 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 PCDH18Q9HCL0 1135 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 AAASQ9NRG9 546 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 HOMER3Q9NSC5 361 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 ABCC13Q9NSE7 274 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 PIGVQ9NUD9 493 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 FNIP2Q9P278 1114 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 HSFX1Q9UBD0 423 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 STK39Q9UEW8 545 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 AFF4Q9UHB7 1163 aaKnown RBP11.44□□□□□ -0.58
ECM1-201ENST00000346569 FZD10Q9ULW2 581 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 PCDHB12Q9Y5F1 795 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 PTPRSQ13332 1948 aa11.44□□□□□ -0.58
ECM1-201ENST00000346569 FAM187AA6NFU0 413 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 TTI1O43156 1089 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 ZMYND10O75800 440 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 SOAT2O75908 522 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 FGF18O76093 207 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 RTN3O95197 1032 aaPredicted RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 SEC24AO95486 1093 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 F9P00740 461 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 ATF2P15336 505 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 TNFRSF8P28908 595 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 RDXP35241 583 aaKnown RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 ADRA1BP35368 520 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 KCNJ1P48048 391 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 TUFMP49411 452 aaKnown RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 GLUD2P49448 558 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 DRG2P55039 364 aaKnown RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 YWHAGP61981 247 aaKnown RBP eCLIP11.43□□□□□ -0.58
ECM1-201ENST00000346569 USP46P62068 366 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 RPL10AP62906 217 aaKnown RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 DEUP1Q05D60 604 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 HABP4Q5JVS0 413 aaKnown RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 ZFYVE27Q5T4F4 411 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 KAZNQ674X7 775 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 DRICH1Q6PGQ1 229 aaPredicted RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 CCDC137Q6PK04 289 aaKnown RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 DENND5BQ6ZUT9 1274 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 MAP7D3Q8IWC1 876 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 VPS52Q8N1B4 723 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 CCDC185Q8N715 623 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 ATL2Q8NHH9 583 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 EDEM1Q92611 657 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 SLCO2A1Q92959 643 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 NTAN1Q96AB6 310 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 FAF2Q96CS3 445 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 RUNDC3BQ96NL0 473 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 RNF157Q96PX1 679 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 HINFPQ9BQA5 517 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 TTLL2Q9BWV7 592 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 NMUR1Q9HB89 426 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 EPB41L5Q9HCM4 733 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.43□□□□□ -0.58
ECM1-201ENST00000346569 GPATCH2LQ9NWQ4 482 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 OSER1Q9NX31 292 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 FBXW11Q9UKB1 542 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 DRG1Q9Y295 367 aaKnown RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 SLC4A7Q9Y6M7 1214 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 COL6A3P12111 3177 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 I6L893 689 aaPredicted RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 C2CD2LO14523 706 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 HEXIM1O94992 359 aaKnown RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 ZDHHC11BP0C7U3 371 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 MCM3P25205 808 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 YWHAQP27348 245 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 BMPR1AP36894 532 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 CXCR3P49682 368 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 CLCN6P51797 869 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 KRT17Q04695 432 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 MMRN1Q13201 1228 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 TRADDQ15628 312 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 MGAT5BQ3V5L5 792 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 ODF2Q5BJF6 829 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 DUPD1Q68J44 220 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 FAM131BQ86XD5 332 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 EIF1ADQ8N9N8 165 aaKnown RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 SLC7A14Q8TBB6 771 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 DQX1Q8TE96 717 aaKnown RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 ERP44Q9BS26 406 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 ZBED2Q9BTP6 218 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 TRIM62Q9BVG3 475 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 ZBP1Q9H171 429 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 PRO3102Q9H379 93 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms