RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ANKRD52Q8NB46 1076 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 B3GALNT2Q8NCR0 500 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 ARL8AQ96BM9 186 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 SENP8Q96LD8 212 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CCDC114Q96M63 670 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CITED4Q96RK1 184 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 ADAM2Q99965 735 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 SLC38A7Q9NVC3 462 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 USP18Q9UMW8 372 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 PLAAQ9Y263 795 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 TIMM13Q9Y5L4 95 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CLDN5O00501 218 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CAPN5O15484 640 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CABYRO75952 493 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 TJP3O95049 919 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 TRUB2O95900 331 aaKnown RBP9.65□□□□□ -0.86
ATG4A-202ENST00000345734 POMCP01189 267 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 KRT14P02533 472 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 KRT7P08729 469 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 BMP2P12643 396 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 LCP1P13796 627 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 RHOQP17081 205 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CETN2P41208 172 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 BCAT1P54687 386 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 ATP11AP98196 1134 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 SLC6A3Q01959 620 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 BST2Q10589 180 aaKnown RBP9.65□□□□□ -0.86
ATG4A-202ENST00000345734 COL19A1Q14993 1142 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 HADHQ16836 314 aaKnown RBP9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CCDC14Q49A88 953 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 TFDP3Q5H9I0 405 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 GPATCH11Q8N954 259 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 OR2W6PQ8NHA6 318 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 ATL2Q8NHH9 583 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 UBLCP1Q8WVY7 318 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-202ENST00000345734 HSPH1Q92598 858 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 LRRC45Q96CN5 670 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CFAP57Q96MR6 1250 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 GLT1D1Q96MS3 346 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CNPY3Q9BT09 278 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 TXLNGYQ9BZA5 131 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 CXorf56Q9H5V9 222 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 ASNSD1Q9NWL6 643 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 DNPEPQ9ULA0 475 aa9.65□□□□□ -0.86
ATG4A-202ENST00000345734 A0A0U1RQF3 1178 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 A0A1W2PQ45 241 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 A0A1W2PQY0 241 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 TP73O15350 636 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 LIASO43766 372 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 ZNF623O75123 536 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 PPFIA2O75334 1257 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 RNF8O76064 485 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 CKBP12277 381 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 BMP1P13497 986 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 PTPN1P18031 435 aaKnown RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 KDELR1P24390 212 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 PTPN7P35236 360 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 VPS41P49754 854 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 RABGGTBP53611 331 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 DYNLT1P63172 113 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 PTK6Q13882 451 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 MRPL58Q14197 206 aaKnown RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 TTMPQ5BVD1 217 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 PAQR9Q6ZVX9 377 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 CYP4V2Q6ZWL3 525 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 FUKQ8N0W3 1084 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 NDRG1Q92597 394 aaKnown RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 ART4Q93070 314 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 TNIP3Q96KP6 325 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 RUFY1Q96T51 708 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 TSEN34Q9BSV6 310 aaKnown RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 RSAD1Q9HA92 442 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 HOMER3Q9NSC5 361 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 SAE1Q9UBE0 346 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 ASIC3Q9UHC3 531 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 ADAM21Q9UKJ8 722 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 INPP5FQ9Y2H2 1132 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 ATP8A1Q9Y2Q0 1164 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 NEU2Q9Y3R4 380 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 ERICH4A6NGS2 130 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 H0YGN5 161 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 I3L4J1 428 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 GABRDO14764 452 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 BEST1O76090 585 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 TFE3P19532 575 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 IVDP26440 423 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 PCK1P35558 622 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 MBTPS1Q14703 1052 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 ACAP1Q15027 740 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 UPP1Q16831 310 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 PAN2Q504Q3 1202 aaKnown RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 MDH1BQ5I0G3 518 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 UBAP2Q5T6F2 1119 aaKnown RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 DSTYKQ6XUX3 929 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 SUGP1Q8IWZ8 645 aaKnown RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 GLIS1Q8NBF1 620 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 KCTD6Q8NC69 237 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 CMASQ8NFW8 434 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-202ENST00000345734 GRK7Q8WTQ7 553 aa9.64□□□□□ -0.87
ATG4A-202ENST00000345734 ZNF296Q8WUU4 475 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms