RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 IDH3BO43837 385 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 TNFRSF8P28908 595 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 FEN1P39748 380 aaKnown RBP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 SIRT2Q8IXJ6 389 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 CDK20Q8IZL9 346 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 TMEM132CQ8N3T6 1108 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 IPMKQ8NFU5 416 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 REPS1Q96D71 796 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 RPS6KB2Q9UBS0 482 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 HARS2P49590 506 aaKnown RBP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 FXR2P51116 673 aaKnown RBP eCLIP19.91■□□□□ 0.787e-6■■□□□ 13.4
HDAC4-201ENST00000345617 EXOSC10Q01780 885 aaKnown RBP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 TUBA3CQ13748 450 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 CYB5R4Q7L1T6 521 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 ALOX12P18054 663 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 CDH3P22223 829 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 HPCAL1P37235 193 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.91■□□□□ 0.781e-6■■■□□ 16.2
HDAC4-201ENST00000345617 DCP1AQ9NPI6 582 aaPredicted RBP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 ZDHHC9Q9Y397 364 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 NOS3P29474 1203 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 FAM98CQ17RN3 349 aaKnown RBP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 POTEHQ6S545 545 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 MYDGFQ969H8 173 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 APOPT1Q96IL0 206 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 CINPQ9BW66 212 aaPredicted RBP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 DDX18Q9NVP1 670 aaKnown RBP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 RPL19P84098 196 aaKnown RBP19.9■□□□□ 0.78
HDAC4-201ENST00000345617 SPIRE1Q08AE8 756 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 BROXQ5VW32 411 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 OLFML1Q6UWY5 402 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 REEP2Q9BRK0 252 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 SERPINE1P05121 402 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 SKP1P63208 163 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 GNA13Q14344 377 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 PROSER3Q2NL68 480 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 TYW3Q6IPR3 259 aaKnown RBP19.9■□□□□ 0.78
HDAC4-201ENST00000345617 PHF20Q9BVI0 1012 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 PGM3O95394 542 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 PAX7P23759 505 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 CASP4P49662 377 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 SH3RF3Q8TEJ3 882 aaPredicted RBP19.9■□□□□ 0.78
HDAC4-201ENST00000345617 STN1Q9H668 368 aaKnown RBP19.9■□□□□ 0.78
HDAC4-201ENST00000345617 RNPEPL1Q9HAU8 725 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 PDGFCQ9NRA1 345 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 MIER2Q8N344 545 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 GPR101Q96P66 508 aaPredicted RBP19.9■□□□□ 0.78
HDAC4-201ENST00000345617 TPST1O60507 370 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 CRTAMO95727 393 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 FMR1Q06787 632 aaKnown RBP eCLIP19.9■□□□□ 0.78
HDAC4-201ENST00000345617 LAYNQ6UX15 382 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 ZNF624Q9P2J8 865 aaPredicted RBP19.9■□□□□ 0.78
HDAC4-201ENST00000345617 CLOCKO15516 846 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 ZNF605Q86T29 641 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 IRX2Q9BZI1 471 aaPredicted RBP19.9■□□□□ 0.78
HDAC4-201ENST00000345617 PLGRKTQ9HBL7 147 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 TRIM39Q9HCM9 518 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 MCM8Q9UJA3 840 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 ACAT1P24752 427 aaKnown RBP19.9■□□□□ 0.78
HDAC4-201ENST00000345617 PTENP60484 403 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 AHSPQ9NZD4 102 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 NAGPAQ9UK23 515 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 L1RE1Q9UN81 338 aa19.9■□□□□ 0.78
HDAC4-201ENST00000345617 PDHBP11177 359 aa19.89■□□□□ 0.78
HDAC4-201ENST00000345617 ARL4DP49703 201 aa19.89■□□□□ 0.78
HDAC4-201ENST00000345617 PIH1D3Q9NQM4 214 aaKnown RBP19.89■□□□□ 0.78
HDAC4-201ENST00000345617 ZCCHC11Q5TAX3 1644 aaKnown RBP19.89■□□□□ 0.78
HDAC4-201ENST00000345617 CHD1O14646 1710 aa19.89■□□□□ 0.78
HDAC4-201ENST00000345617 FAM92AA1XBS5 289 aa19.89■□□□□ 0.78
HDAC4-201ENST00000345617 FAM47E-STBD1D6RA91 191 aa19.89■□□□□ 0.78
HDAC4-201ENST00000345617 DUSP12Q9UNI6 340 aa19.89■□□□□ 0.78
HDAC4-201ENST00000345617 CRABP2P29373 138 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 ANKS6Q68DC2 871 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 ABRAXAS1Q6UWZ7 409 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 LPAR1Q92633 364 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 NSMCE2Q96MF7 247 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 MIEF1Q9NQG6 463 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 TSR3Q9UJK0 312 aaKnown RBP19.89■□□□□ 0.77
HDAC4-201ENST00000345617 NR3C2P08235 984 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 PRKAR1AP10644 381 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 RAG1P15918 1043 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 GRK4P32298 578 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 KLHDC7AQ5VTJ3 777 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 APOBEC3FQ8IUX4 373 aaKnown RBP19.89■□□□□ 0.77
HDAC4-201ENST00000345617 IZUMO1Q8IYV9 350 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 CHID1Q9BWS9 393 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 MOCS2O96007 188 aaPredicted RBP19.89■□□□□ 0.77
HDAC4-201ENST00000345617 HOXB8P17481 243 aaPredicted RBP19.89■□□□□ 0.77
HDAC4-201ENST00000345617 SWSAP1Q6NVH7 229 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 AASDHPPTQ9NRN7 309 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 CRLS1Q9UJA2 301 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 FLT1P17948 1338 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 ME2P23368 584 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 BNIPLQ7Z465 357 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 DARSP14868 501 aaKnown RBP19.89■□□□□ 0.77
HDAC4-201ENST00000345617 ETFBP38117 255 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 SLC1A6P48664 564 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 DLG4P78352 724 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 DCAF6Q58WW2 860 aa19.89■□□□□ 0.77
HDAC4-201ENST00000345617 OOSP2Q86WS3 158 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms