RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 NDRG1Q92597 394 aaKnown RBP26.26■■□□□ 1.79
TRADD-201ENST00000345057 TMEM30AQ9NV96 361 aa26.26■■□□□ 1.79
TRADD-201ENST00000345057 FZD10Q9ULW2 581 aa26.26■■□□□ 1.79
TRADD-201ENST00000345057 CFAP69A5D8W1 941 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 NUDT17P0C025 328 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 CA9Q16790 459 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 PLD5Q8N7P1 536 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 SAE1Q9UBE0 346 aaPredicted RBP26.25■■□□□ 1.79
TRADD-201ENST00000345057 TPX2Q9ULW0 747 aaKnown RBP26.25■■□□□ 1.79
TRADD-201ENST00000345057 USP3Q9Y6I4 520 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 SF3B1O75533 1304 aaKnown RBP eCLIP26.25■■□□□ 1.791e-8■■■■■ 103.4
TRADD-201ENST00000345057 OR6C75A6NL08 312 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 PECAM1P16284 738 aaPredicted RBP26.25■■□□□ 1.79
TRADD-201ENST00000345057 NR2C2P49116 596 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 TLE2Q04725 743 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 GPS1Q13098 491 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 MORF4L2Q15014 288 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 HIBCHQ6NVY1 386 aaPredicted RBP26.25■■□□□ 1.79
TRADD-201ENST00000345057 FAM131BQ86XD5 332 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 CRIPAKQ8N1N5 446 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 NTAN1Q96AB6 310 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 SCLYQ96I15 445 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 TMEM209Q96SK2 561 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 OXCT2Q9BYC2 517 aaPredicted RBP26.25■■□□□ 1.79
TRADD-201ENST00000345057 TMEM51Q9NW97 253 aa26.25■■□□□ 1.79
TRADD-201ENST00000345057 GOLGA6CA6NDK9 693 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 SMAPO00193 183 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 TP73O15350 636 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 IFNB1P01574 187 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 MYZAPP0CAP1 466 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 GOLGA6DP0CG33 693 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 NCAM1P13591 858 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 CYP2F1P24903 491 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 ATXN1P54253 815 aaKnown RBP26.24■■□□□ 1.79
TRADD-201ENST00000345057 CCL23P55773 120 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 TRIM60Q495X7 471 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 EFHC2Q5JST6 749 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 VARS2Q5ST30 1063 aaKnown RBP26.24■■□□□ 1.79
TRADD-201ENST00000345057 CEP85LQ5SZL2 805 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 ZNF280DQ6N043 979 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 VSTM1Q6UX27 236 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 BZW1Q7L1Q6 419 aaKnown RBP26.24■■□□□ 1.79
TRADD-201ENST00000345057 LRRC43Q8N309 656 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 CCDC185Q8N715 623 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 PCDH19Q8TAB3 1148 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 SLC7A14Q8TBB6 771 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 RHOBTB2Q9BYZ6 727 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 ADAM33Q9BZ11 813 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 GOLGA6AQ9NYA3 693 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 NAALADL1Q9UQQ1 740 aa26.24■■□□□ 1.79
TRADD-201ENST00000345057 H0YGN5 161 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 RFC2P35250 354 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 GRIK1P39086 918 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 IFFO1Q0D2I5 559 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 ARL13BQ3SXY8 428 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 SLC39A12Q504Y0 691 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 SYPL2Q5VXT5 272 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 HFE2Q6ZVN8 426 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 PQLC3Q8N755 202 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 ANKLE1Q8NAG6 615 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 PPP1R12CQ9BZL4 782 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 NFS1Q9Y697 457 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 TTC3P53804 2025 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.23■■□□□ 1.79
TRADD-201ENST00000345057 H3BRJ5 948 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 FYNP06241 537 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 MNX1P50219 401 aaPredicted RBP26.23■■□□□ 1.79
TRADD-201ENST00000345057 ZNF135P52742 658 aaPredicted RBP26.23■■□□□ 1.79
TRADD-201ENST00000345057 OTUD1Q5VV17 481 aaPredicted RBP26.23■■□□□ 1.79
TRADD-201ENST00000345057 DARS2Q6PI48 645 aaKnown RBP26.23■■□□□ 1.79
TRADD-201ENST00000345057 CCDC25Q86WR0 208 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 ZNF333Q96JL9 665 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 KCTD15Q96SI1 283 aaPredicted RBP26.23■■□□□ 1.79
TRADD-201ENST00000345057 SHOC2Q9UQ13 582 aa26.23■■□□□ 1.79
TRADD-201ENST00000345057 PTPRDP23468 1912 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 TRIM66O15016 1216 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 ACTN2P35609 894 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 SMARCB1Q12824 385 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 NME3Q13232 169 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 FAM171A1Q5VUB5 890 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 HOOK3Q86VS8 718 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 RELL1Q8IUW5 271 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 ZCCHC9Q8N567 271 aaKnown RBP26.22■■□□□ 1.79
TRADD-201ENST00000345057 CSPG4P5Q96PW8 444 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 MTMR10Q9NXD2 777 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 BRCA2P51587 3418 aa26.22■■□□□ 1.79
TRADD-201ENST00000345057 TBKBP1A7MCY6 615 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 HMGB1P1B2RPK0 211 aaPredicted RBP26.21■■□□□ 1.79
TRADD-201ENST00000345057 H7C0C1 242 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 FGFR3P22607 806 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 ATP5OP48047 213 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 SCAPQ12770 1279 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 XRCC4Q13426 336 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 IKBKEQ14164 716 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 MRPL58Q14197 206 aaKnown RBP26.21■■□□□ 1.79
TRADD-201ENST00000345057 CTXN3Q4LDR2 81 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 CNKSR3Q6P9H4 555 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 C1orf228Q6PIY5 440 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 FAM76AQ8TAV0 307 aa26.21■■□□□ 1.79
TRADD-201ENST00000345057 FAM204AQ9H8W3 233 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms