RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CRISPLD1Q9H336 500 aa14.14□□□□□ -0.15
CDC42-202ENST00000344548 DMAP1Q9NPF5 467 aaPredicted RBP14.14□□□□□ -0.15
CDC42-202ENST00000344548 ABI2Q9NYB9 513 aaPredicted RBP14.14□□□□□ -0.15
CDC42-202ENST00000344548 CWC15Q9P013 229 aaKnown RBP14.14□□□□□ -0.15
CDC42-202ENST00000344548 PLAAQ9Y263 795 aa14.14□□□□□ -0.15
CDC42-202ENST00000344548 APOC4-APOC2K7ER74 178 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 TNFRSF10BO14763 440 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 SOAT2O75908 522 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 IFNB1P01574 187 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 APOC2P02655 101 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 ALDH2P05091 517 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 NCAM1P13591 858 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 TSPY1Q01534 308 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 SLC10A2Q12908 348 aaPredicted RBP14.13□□□□□ -0.15
CDC42-202ENST00000344548 DPYSL2Q16555 572 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 DDR2Q16832 855 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 P3H1Q32P28 736 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 RTP2Q5QGT7 225 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 CFAP58Q5T655 872 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 NPAS4Q8IUM7 802 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 ATAD1Q8NBU5 361 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 SLC7A14Q8TBB6 771 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 GPR152Q8TDT2 470 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 GRK7Q8WTQ7 553 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 TOX2Q96NM4 488 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 WDR6Q9NNW5 1121 aaKnown RBP14.13□□□□□ -0.15
CDC42-202ENST00000344548 WHRNQ9P202 907 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 FZD10Q9ULW2 581 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 DRG1Q9Y295 367 aaKnown RBP14.13□□□□□ -0.15
CDC42-202ENST00000344548 NR2E3Q9Y5X4 410 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 MICAL3Q7RTP6 2002 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 COL4A6Q14031 1691 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 FAM72CH0Y354 149 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 SGK1O00141 431 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 LTFP02788 710 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 SHBGP04278 402 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 ITGAVP06756 1048 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 GOT1P17174 413 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 GAD2Q05329 585 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 MRPL58Q14197 206 aaKnown RBP14.13□□□□□ -0.15
CDC42-202ENST00000344548 TTMPQ5BVD1 217 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 FAM72AQ5TYM5 149 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 PM20D1Q6GTS8 502 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 FAM72DQ6L9T8 149 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 ZNF365Q70YC5 407 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 FAM72BQ86X60 149 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 SPATA2LQ8IUW3 424 aaPredicted RBP14.13□□□□□ -0.15
CDC42-202ENST00000344548 APBB2Q92870 758 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 FAF2Q96CS3 445 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 SNF8Q96H20 258 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 SH3GL2Q99962 352 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 USP3Q9Y6I4 520 aa14.13□□□□□ -0.15
CDC42-202ENST00000344548 RNF40O75150 1001 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 VNN2O95498 520 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 RBP3P10745 1247 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 ATF2P15336 505 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 AMPD1P23109 780 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 GRIK1P39086 918 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 SLC5A3P53794 718 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 EIF3EP60228 445 aaKnown RBP14.12□□□□□ -0.15
CDC42-202ENST00000344548 GBE1Q04446 702 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 PDK2Q15119 407 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 BSPRYQ5W0U4 402 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 SLC9A4Q6AI14 798 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 CCDC25Q86WR0 208 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 SCN4BQ8IWT1 228 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 UHMK1Q8TAS1 419 aaKnown RBP14.12□□□□□ -0.15
CDC42-202ENST00000344548 TMEM39AQ9NV64 488 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 VPS18Q9P253 973 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 FEZ2Q9UHY8 353 aaPredicted RBP14.12□□□□□ -0.15
CDC42-202ENST00000344548 NUDT5Q9UKK9 219 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 HEY1Q9Y5J3 304 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 TRIM43BA6NCK2 446 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 CAPN9O14815 690 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 FBXO21O94952 628 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 ARPP19P56211 112 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 USP46P62068 366 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 DEUP1Q05D60 604 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 GPS1Q13098 491 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 NOMO1Q15155 1222 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 IZUMO3Q5VZ72 239 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 ALS2CLQ60I27 953 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 FAM117BQ6P1L5 589 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 FUT10Q6P4F1 479 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 SYDE1Q6ZW31 735 aaPredicted RBP14.12□□□□□ -0.15
CDC42-202ENST00000344548 FAM71DQ8N9W8 422 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 TRIM43Q96BQ3 446 aaPredicted RBP14.12□□□□□ -0.15
CDC42-202ENST00000344548 CSPG4P5Q96PW8 444 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 VN1R3Q9BXE9 311 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 MAK16Q9BXY0 300 aaKnown RBP14.12□□□□□ -0.15
CDC42-202ENST00000344548 NMUR1Q9HB89 426 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 SNX10Q9Y5X0 201 aa14.12□□□□□ -0.15
CDC42-202ENST00000344548 ADAM12O43184 909 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 ITIH2P19823 946 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 FGFR3P22607 806 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 PAX3P23760 479 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 RDXP35241 583 aaKnown RBP14.11□□□□□ -0.15
CDC42-202ENST00000344548 GJA8P48165 433 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 CALCOCO2Q13137 446 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 CTXN3Q4LDR2 81 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms