RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 LRRC8DQ7L1W4 858 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 BRSK2Q8IWQ3 736 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 CGRRF1Q99675 332 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 ZDHHC6Q9H6R6 413 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 AGPAT5Q9NUQ2 364 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 HPS5Q9UPZ3 1129 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 FDX1P10109 184 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 GARTP22102 1010 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 SLC1A1P43005 524 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 FSCN1Q16658 493 aaKnown RBP12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 UGP2Q16851 508 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 UTP15Q8TED0 518 aaKnown RBP12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 TRIT1Q9H3H1 467 aaKnown RBP12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 ZW10O43264 779 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 FKTNO75072 461 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 ZNF23P17027 643 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 SP3Q02447 781 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 XRCC4Q13426 336 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 FAM83EQ2M2I3 478 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 EDRF1Q3B7T1 1238 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 SNRNP27Q8WVK2 155 aaKnown RBP12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 PRRG4Q9BZD6 226 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 AMPD2Q01433 879 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 ZMYND8Q9ULU4 1186 aaPredicted RBP12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 SH3GLB1Q9Y371 365 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 CAP2P40123 477 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 SEC13P55735 322 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 ZCCHC8Q6NZY4 707 aaKnown RBP12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 CBWD2Q8IUF1 395 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 SLC4A9Q96Q91 983 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 XPO6Q96QU8 1125 aaKnown RBP12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 SLC9A7Q96T83 725 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 ZCCHC17Q9NP64 241 aaKnown RBP12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 TMEM191CA6NGB0 347 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 SYN1P17600 705 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 COMTP21964 271 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 RFC5P40937 340 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 TRAF2Q12933 501 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 ITIH5Q86UX2 942 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 CACTIN-AS1Q8N1I8 211 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 PHF21BQ96EK2 531 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 RGS18Q9NS28 235 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 PHF20L1A8MW92 1017 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 CTCFP49711 727 aaPredicted RBP12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 ZNF544Q6NX49 715 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 GPR152Q8TDT2 470 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 NEK7Q8TDX7 302 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 SKA1Q96BD8 255 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 VTA1Q9NP79 307 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 DDX43Q9NXZ2 648 aaKnown RBP12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 ARHGEF12Q9NZN5 1544 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 RBMXL2O75526 392 aaKnown RBP12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 PRKAG1P54619 331 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 NFIAQ12857 509 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 GRIK4Q16099 956 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 AASDHQ4L235 1098 aaPredicted RBP12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 RAD21L1Q9H4I0 556 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 WDR41Q9HAD4 459 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 ZNHIT2Q9UHR6 403 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 ERCC6L2Q5T890 1561 aa12.59□□□□□ -0.39
TRIOBP-202ENST00000344404 SCGNO76038 276 aa12.58□□□□□ -0.39
TRIOBP-202ENST00000344404 TGM3Q08188 693 aa12.58□□□□□ -0.39
TRIOBP-202ENST00000344404 MMRN1Q13201 1228 aa12.58□□□□□ -0.39
TRIOBP-202ENST00000344404 SLC39A12Q504Y0 691 aa12.58□□□□□ -0.39
TRIOBP-202ENST00000344404 CCDC185Q8N715 623 aa12.58□□□□□ -0.39
TRIOBP-202ENST00000344404 ARNTL2Q8WYA1 636 aa12.58□□□□□ -0.39
TRIOBP-202ENST00000344404 MRPL48Q96GC5 212 aaKnown RBP12.58□□□□□ -0.39
TRIOBP-202ENST00000344404 RMND5AQ9H871 391 aa12.58□□□□□ -0.39
TRIOBP-202ENST00000344404 SPG21Q9NZD8 308 aa12.58□□□□□ -0.39
TRIOBP-202ENST00000344404 PSMC3IPQ9P2W1 217 aaPredicted RBP12.58□□□□□ -0.39
TRIOBP-202ENST00000344404 MAGI2Q86UL8 1455 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 PHF2O75151 1096 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 ITGA8P53708 1063 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 FAM131BQ86XD5 332 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 ISCA1Q9BUE6 129 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 HTATIP2Q9BUP3 242 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 GPRC5DQ9NZD1 345 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 RPS6KL1Q9Y6S9 549 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 ZNF500O60304 480 aaPredicted RBP12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 GCLCP48506 637 aaPredicted RBP12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 HERVK_113P62684 666 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 NAA30Q147X3 362 aaPredicted RBP12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 TTC23Q5W5X9 447 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 TTC33Q6PID6 262 aaPredicted RBP12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 SPATA21Q7Z572 469 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 COLGALT2Q8IYK4 626 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 IL17RAQ96F46 866 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 MYMKA6NI61 221 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 SCAMP1O15126 338 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 RHAGQ02094 409 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 CXCL9Q07325 125 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 GRIK3Q13003 919 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 POU6F1Q14863 301 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 ZNF57Q68EA5 555 aaPredicted RBP12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 SHC4Q6S5L8 630 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 C16orf86Q6ZW13 317 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 BBS4Q96RK4 519 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 SPATC1LQ9H0A9 340 aa12.58□□□□□ -0.4
TRIOBP-202ENST00000344404 TNFSF13BQ9Y275 285 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms