RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ZNF211Q13398 564 aaPredicted RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 DOK7Q18PE1 504 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 SMU1Q2TAY7 513 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 TMEM179Q6ZVK1 233 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 LOC110117498-PIK3R3F6TDL0 507 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 SEC24BO95487 1268 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 PTGER2P43116 358 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 GJA8P48165 433 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 LONRF1Q17RB8 773 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 C5orf22Q49AR2 442 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 FAM83BQ5T0W9 1011 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 TTC27Q6P3X3 843 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 CYP20A1Q6UW02 462 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 PIK3R3Q92569 461 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 PNKPQ96T60 521 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 CST11Q9H112 138 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 NOD2Q9HC29 1040 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 ZNF432O94892 652 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 RBP3P10745 1247 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 TNNI3P19429 210 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 GSPT2Q8IYD1 628 aaKnown RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 MMP19Q99542 508 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 BHLHE41Q9C0J9 482 aaPredicted RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 EPB41L4AQ9HCS5 686 aaPredicted RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 CRTAMO95727 393 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 SERPINA1P01009 418 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 EIF2AK2P19525 551 aaKnown RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 GTF2H1P32780 548 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 TUBA4AP68366 448 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 TOP3AQ13472 1001 aaPredicted RBP18.11■□□□□ 0.49
SMAD4-201ENST00000342988 ADHFE1Q8IWW8 467 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 OR7A2PQ8NGA2 310 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 MAGEB18Q96M61 343 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 CLEC4AQ9UMR7 237 aa18.11■□□□□ 0.49
SMAD4-201ENST00000342988 UTYO14607 1347 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 ANKRD65E5RJM6 399 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 WEE2P0C1S8 567 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 TDRPQ86YL5 185 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 ZDHHC13Q8IUH4 622 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 CDH7Q9ULB5 785 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 FCER1AP12319 257 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 RBP5P82980 135 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 TNFAIP8L3Q5GJ75 292 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 FNIP1Q8TF40 1166 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 MCM8Q9UJA3 840 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 SNX6Q9UNH7 406 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 TPST1O60507 370 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 MAGEC3Q8TD91 643 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 NCKIPSDQ9NZQ3 722 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 ADGRF5Q8IZF2 1346 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 PLOD3O60568 738 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 SUCOQ9UBS9 1254 aaKnown RBP18.1■□□□□ 0.49
SMAD4-201ENST00000342988 AMACRQ9UHK6 382 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 ENTPD4Q9Y227 616 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 PCDHB7Q9Y5E2 793 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 NDUFB9Q9Y6M9 179 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 C15orf38-AP3S2A0A0A6YYH1 394 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 PHF20L1A8MW92 1017 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 SLC35C2Q9NQQ7 365 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 INTS7Q9NVH2 962 aaKnown RBP18.1■□□□□ 0.49
SMAD4-201ENST00000342988 MYOM2P54296 1465 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 USP17L3A6NCW0 530 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 USP17L4A6NCW7 530 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 CCDC154A6NI56 674 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 GLRA3O75311 464 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 APBA3O96018 575 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 ATP5BP06576 529 aaKnown RBP18.1■□□□□ 0.49
SMAD4-201ENST00000342988 HOXA13P31271 388 aaPredicted RBP18.1■□□□□ 0.49
SMAD4-201ENST00000342988 UGT1A5P35504 534 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 USP17L1Q7RTZ2 530 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 MEIOBQ8N635 442 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 FAM120BQ96EK7 910 aaKnown RBP18.1■□□□□ 0.49
SMAD4-201ENST00000342988 PRDM8Q9NQV8 689 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 GIT1Q9Y2X7 761 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 SLC26A4O43511 780 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 ITIH1P19827 911 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 ARHGEF19Q8IW93 802 aa18.1■□□□□ 0.49
SMAD4-201ENST00000342988 RARBP10826 455 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 MCEEQ96PE7 176 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 KCTD10Q9H3F6 313 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 KCNIP3Q9Y2W7 256 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 MAP2P11137 1827 aaKnown RBP18.09■□□□□ 0.49
SMAD4-201ENST00000342988 CACNB2Q08289 660 aaPredicted RBP18.09■□□□□ 0.49
SMAD4-201ENST00000342988 SMIM5Q71RC9 77 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 GRAMD1CQ8IYS0 662 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 RASGRP4Q8TDF6 673 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 NSUN6Q8TEA1 469 aaKnown RBP18.09■□□□□ 0.49
SMAD4-201ENST00000342988 EXO5Q9H790 373 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 IRGMA1A4Y4 181 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 COASYQ13057 564 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 DDX39BQ13838 428 aaKnown RBP18.09■□□□□ 0.49
SMAD4-201ENST00000342988 LRRC69Q6ZNQ3 347 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 SIX5Q8N196 739 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 ZNF655Q8N720 491 aaPredicted RBP18.09■□□□□ 0.49
SMAD4-201ENST00000342988 CYLDQ9NQC7 956 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 DRG1Q9Y295 367 aaKnown RBP18.09■□□□□ 0.49
SMAD4-201ENST00000342988 GPC6Q9Y625 555 aaPredicted RBP18.09■□□□□ 0.49
SMAD4-201ENST00000342988 RBP1P09455 135 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 YY1P25490 414 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 STIP1P31948 543 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms