RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 DAB2P98082 770 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 MPP3Q13368 585 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 ZNF268Q14587 947 aaPredicted RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 DGKDQ16760 1214 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 THEM5Q8N1Q8 247 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 PABPC5Q96DU9 382 aaKnown RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 C12orf65Q9H3J6 166 aaKnown RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 PMPCBO75439 489 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 RARBP10826 455 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 GNL1P36915 607 aaPredicted RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 BAG6P46379 1132 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 ECSITQ9BQ95 431 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 CLIC5Q9NZA1 410 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 SLC12A4Q9UP95 1085 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 RICTORQ6R327 1708 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 ALOX15BO15296 676 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 DEAF1O75398 565 aaPredicted RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 ALBP02768 609 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 SERPINB10P48595 397 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 PKNOX1P55347 436 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 TSPY1Q01534 308 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 BLMHQ13867 455 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 VPS72Q15906 364 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 FAM83EQ2M2I3 478 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 ZDHHC24Q6UX98 284 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 ASAP3Q8TDY4 903 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 SPON2Q9BUD6 331 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 DENND2DQ9H6A0 471 aaPredicted RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 CHCHD3Q9NX63 227 aaKnown RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 SAC3D1A6NKF1 404 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 NCAM1P13591 858 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 PPIDQ08752 370 aaKnown RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 ZSCAN18Q8TBC5 510 aaPredicted RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 RMDN1Q96DB5 314 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 GJD4Q96KN9 370 aaPredicted RBP15.28■□□□□ 0.04
RRP1B-201ENST00000340648 ADGRA2Q96PE1 1338 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 MRC1P22897 1456 aa15.28■□□□□ 0.04
RRP1B-201ENST00000340648 TBC1D4O60343 1298 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 HMGCRP04035 888 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 FUT11Q495W5 492 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 ABI1Q8IZP0 508 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 TMEM161BQ8NDZ6 487 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 PIWIL2Q8TC59 973 aaKnown RBP15.27■□□□□ 0.04
RRP1B-201ENST00000340648 DCUN1D5Q9BTE7 237 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 EIF2AQ9BY44 585 aaKnown RBP15.27■□□□□ 0.04
RRP1B-201ENST00000340648 AP4S1Q9Y587 144 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 AKAP12Q02952 1782 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 NFAT5O94916 1531 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 GSC2O15499 205 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 ESRRBO95718 433 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 NCKAP1LP55160 1127 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 KCNK10P57789 538 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 NOMO3P69849 1222 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 MARK2Q7KZI7 788 aaKnown RBP15.27■□□□□ 0.04
RRP1B-201ENST00000340648 ULK2Q8IYT8 1036 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 ZDHHC18Q9NUE0 388 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 UBP1Q9NZI7 540 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 RPL26L1Q9UNX3 145 aaKnown RBP15.27■□□□□ 0.04
RRP1B-201ENST00000340648 hCG_1818297A0A087WSY0 165 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 TYW5A2RUC4 315 aaKnown RBP15.27■□□□□ 0.04
RRP1B-201ENST00000340648 SUPT3HB4E1H0 165 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 ITGAVP06756 1048 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 GP5P40197 560 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 TRPC1P48995 793 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 ZNF235Q14590 738 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 FASTKD3Q14CZ7 662 aaKnown RBP15.27■□□□□ 0.04
RRP1B-201ENST00000340648 AGKQ53H12 422 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 TAS2R42Q7RTR8 314 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 DHDDSQ86SQ9 333 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 KIAA2013Q8IYS2 634 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 MKL1Q969V6 931 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 PIM2Q9P1W9 311 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 BLOC1S6Q9UL45 172 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 STXBP5LQ9Y2K9 1186 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 TSC22D4Q9Y3Q8 395 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 PPME1Q9Y570 386 aa15.27■□□□□ 0.04
RRP1B-201ENST00000340648 NKRFO15226 690 aaKnown RBP eCLIP15.27■□□□□ 0.03
RRP1B-201ENST00000340648 TMCC1O94876 653 aa15.27■□□□□ 0.03
RRP1B-201ENST00000340648 STAG3L1P0CL83 205 aa15.27■□□□□ 0.03
RRP1B-201ENST00000340648 SIKE1Q9BRV8 207 aa15.27■□□□□ 0.03
RRP1B-201ENST00000340648 SIX2Q9NPC8 291 aa15.27■□□□□ 0.03
RRP1B-201ENST00000340648 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
RRP1B-201ENST00000340648 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
RRP1B-201ENST00000340648 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
RRP1B-201ENST00000340648 USP1O94782 785 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 MICAL2O94851 1124 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 EIF4BP23588 611 aaKnown RBP15.26■□□□□ 0.03
RRP1B-201ENST00000340648 TDRD10Q5VZ19 366 aaKnown RBP15.26■□□□□ 0.03
RRP1B-201ENST00000340648 DDX28Q9NUL7 540 aaKnown RBP15.26■□□□□ 0.03
RRP1B-201ENST00000340648 TSPAN16Q9UKR8 245 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 H0Y626 953 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 MTSS1O43312 755 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 TRIM13O60858 407 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 TRIM16O95361 564 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 ZNF23P17027 643 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 NFKBIAP25963 317 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 CHN2P52757 468 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 PHACTR1Q9C0D0 580 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms