RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PHC3Q8NDX5 983 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 HPDLQ96IR7 371 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 PPCSQ9HAB8 311 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 DNAJC16Q9Y2G8 782 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 A6NHS1 94 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 GPR25O00155 361 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 NDC80O14777 642 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 KRT38O76015 456 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 METTL18O95568 372 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 STAG3L1P0CL83 205 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 SERPINB6P35237 376 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 GBE1Q04446 702 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 DCAF15Q66K64 600 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 TRNP1Q6NT89 227 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 CCNYQ8ND76 341 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 SH3TC2Q8TF17 1288 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 RNF157Q96PX1 679 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 TUBB6Q9BUF5 446 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 PHACTR1Q9C0D0 580 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 ETNK2Q9NVF9 386 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 SIX4Q9UIU6 781 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 PLLPQ9Y342 182 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 MFHAS1Q9Y4C4 1052 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 WDR27A2RRH5 827 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 NOMO1Q15155 1222 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 RALGPS1Q5JS13 557 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 SLC30A9Q6PML9 568 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 ZPBP2Q6X784 338 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 SULF1Q8IWU6 871 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 SPATA33Q96N06 139 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 TMEM134Q9H6X4 195 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 PAPOLBQ9NRJ5 636 aaKnown RBP14.92□□□□□ -0.02
CPSF7-201ENST00000340437 HOXC10Q9NYD6 342 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 PAK5Q9P286 719 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 TTLL3Q9Y4R7 772 aa14.92□□□□□ -0.02
CPSF7-201ENST00000340437 HCRTO43612 131 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 ITM2AO43736 263 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 OPHN1O60890 802 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 MAFO75444 373 aaPredicted RBP14.91□□□□□ -0.02
CPSF7-201ENST00000340437 PDGFRBP09619 1106 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 RARBP10826 455 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 LCP1P13796 627 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 ACADSP16219 412 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 BIRC2Q13490 618 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 GOLGA7BQ2TAP0 167 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 SESTD1Q86VW0 696 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 UBR7Q8N806 425 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 MOCOSQ96EN8 888 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 AGAP3Q96P47 875 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 CDT1Q9H211 546 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 PCDHGC3Q9UN70 934 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 STK10O94804 968 aaKnown RBP14.91□□□□□ -0.02
CPSF7-201ENST00000340437 ARIH2O95376 493 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 VTNP04004 478 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 ADORA2BP29275 332 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 SDC4P31431 198 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 ABCD1P33897 745 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 AP3M2P53677 418 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 IRX1P78414 480 aaPredicted RBP14.91□□□□□ -0.02
CPSF7-201ENST00000340437 MRPS5P82675 430 aaKnown RBP14.91□□□□□ -0.02
CPSF7-201ENST00000340437 TMEM62Q0P6H9 643 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 Q3C1V9 767 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 TREML2Q5T2D2 321 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 NIPA2Q8N8Q9 360 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 CMASQ8NFW8 434 aaPredicted RBP14.91□□□□□ -0.02
CPSF7-201ENST00000340437 WWP1Q9H0M0 922 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 NDE1Q9NXR1 346 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 E7ESA3 106 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 TRAFD1O14545 582 aaPredicted RBP14.91□□□□□ -0.02
CPSF7-201ENST00000340437 PIGRP01833 764 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 ADORA2AP29274 412 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 CCNG1P51959 295 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 GRIK3Q13003 919 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 OLIG2Q13516 323 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 FASTKD1Q53R41 847 aaKnown RBP14.91□□□□□ -0.02
CPSF7-201ENST00000340437 PPM1JQ5JR12 505 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 GLRA4Q5JXX5 417 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 IER5Q5VY09 327 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 FBXO16Q8IX29 292 aaPredicted RBP14.91□□□□□ -0.02
CPSF7-201ENST00000340437 REPS2Q8NFH8 660 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 CNPY3Q9BT09 278 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 DHRS4Q9BTZ2 278 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 MAN1C1Q9NR34 630 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 LRCH1Q9Y2L9 728 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 SNX9Q9Y5X1 595 aa14.91□□□□□ -0.02
CPSF7-201ENST00000340437 E7ENQ6 273 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 APOEP02649 317 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 GHRHRQ02643 423 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 KCNJ11Q14654 390 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 TCHHL1Q5QJ38 904 aaPredicted RBP14.9□□□□□ -0.02
CPSF7-201ENST00000340437 CATSPERGQ6ZRH7 1159 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 CAND1Q86VP6 1230 aaKnown RBP14.9□□□□□ -0.02
CPSF7-201ENST00000340437 ULK2Q8IYT8 1036 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 NME8Q8N427 588 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 PCDH19Q8TAB3 1148 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 ZNF398Q8TD17 642 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 CLEC4CQ8WTT0 213 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 NDRG1Q92597 394 aaKnown RBP14.9□□□□□ -0.02
CPSF7-201ENST00000340437 SNRNP25Q9BV90 132 aaKnown RBP14.9□□□□□ -0.02
CPSF7-201ENST00000340437 ZNF358Q9NW07 568 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms