RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 HOXC11O43248 304 aaPredicted RBP15.31■□□□□ 0.04
ERCC1-203ENST00000340192 LILRB5O75023 590 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 LETM1O95202 739 aaPredicted RBP15.31■□□□□ 0.04
ERCC1-203ENST00000340192 HMBSP08397 361 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 GNA15P30679 374 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 HOXC13P31276 330 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 USP8P40818 1118 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 EIF2DP41214 584 aaKnown RBP15.31■□□□□ 0.04
ERCC1-203ENST00000340192 DAOAP59103 153 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 COG7P83436 770 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 KDSRQ06136 332 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 DMWDQ09019 674 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 MESP2Q0VG99 397 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 TCP11X2Q5H9J9 407 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 BSPRYQ5W0U4 402 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 BTBD8Q5XKL5 378 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 SASS6Q6UVJ0 657 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 Q6ZNB5 142 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 SFTPA1Q8IWL2 248 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 SCML4Q8N228 414 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 NAT16Q8N8M0 369 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 ENOX1Q8TC92 643 aaKnown RBP15.31■□□□□ 0.04
ERCC1-203ENST00000340192 SIX2Q9NPC8 291 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 ACP6Q9NPH0 428 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 POLR3BQ9NW08 1133 aaPredicted RBP15.31■□□□□ 0.04
ERCC1-203ENST00000340192 AJAP1Q9UKB5 411 aaPredicted RBP15.31■□□□□ 0.04
ERCC1-203ENST00000340192 STRIP2Q9ULQ0 834 aa15.31■□□□□ 0.04
ERCC1-203ENST00000340192 PES1O00541 588 aaKnown RBP15.3■□□□□ 0.04
ERCC1-203ENST00000340192 THAP12O43422 761 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 MED7O43513 233 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 KAT7O95251 611 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 KLKB1P03952 638 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 EEF1GP26641 437 aaKnown RBP15.3■□□□□ 0.04
ERCC1-203ENST00000340192 CORO1AP31146 461 aaKnown RBP15.3■□□□□ 0.04
ERCC1-203ENST00000340192 FNTBP49356 437 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 SEC13P55735 322 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 HEATR6Q6AI08 1181 aaKnown RBP15.3■□□□□ 0.04
ERCC1-203ENST00000340192 DENND1BQ6P3S1 775 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 TPGS1Q6ZTW0 290 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 C11orf57Q6ZUT1 292 aaPredicted RBP15.3■□□□□ 0.04
ERCC1-203ENST00000340192 ETFBKMTQ8IXQ9 262 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 PHTF2Q8N3S3 785 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 SUMF1Q8NBK3 374 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 CLEC4CQ8WTT0 213 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 ZNF606Q8WXB4 792 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 SHC3Q92529 594 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 EDEM1Q92611 657 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 HSFY1Q96LI6 401 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 ARHGEF4Q9NR80 690 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 ABCC13Q9NSE7 274 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 OLA1Q9NTK5 396 aaKnown RBP15.3■□□□□ 0.04
ERCC1-203ENST00000340192 DNAJC12Q9UKB3 198 aa15.3■□□□□ 0.04
ERCC1-203ENST00000340192 EML5Q05BV3 1969 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 SLC12A8A0AV02 714 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 ANTXRLA6NF34 631 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.29■□□□□ 0.04
ERCC1-203ENST00000340192 NEDD8-MDP1E9PL57 170 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 FBXO21O94952 628 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 APODP05090 189 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 HOXA6P31267 233 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 GRIA2P42262 883 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 GPD2P43304 727 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 STX1AQ16623 288 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 C2orf27AQ580R0 203 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 CCDC183Q5T5S1 534 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 CDKAL1Q5VV42 579 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 DPY19L2P1Q6NXN4 242 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 LONP2Q86WA8 852 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 FMNL3Q8IVF7 1028 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 CCDC26Q8TAB7 109 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 USP33Q8TEY7 942 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 RNF139Q8WU17 664 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 IRGQQ8WZA9 623 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 BBS2Q9BXC9 721 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 MIS12Q9H081 205 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 EPC1Q9H2F5 836 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 ST7Q9NRC1 585 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 ANO10Q9NW15 660 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 WDR35Q9P2L0 1181 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 SLC8A2Q9UPR5 921 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 ZNF510Q9Y2H8 683 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 ZNF292O60281 2723 aa15.29■□□□□ 0.04
ERCC1-203ENST00000340192 A0A0A0MRY4 1105 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 TULP3O75386 442 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 TYRP14679 529 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 PXNP49023 591 aaPredicted RBP15.28■□□□□ 0.04
ERCC1-203ENST00000340192 RPL34P49207 117 aaKnown RBP15.28■□□□□ 0.04
ERCC1-203ENST00000340192 KCNMA1Q12791 1236 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 MEA1Q16626 185 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 SYT13Q7L8C5 426 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 DENND1CQ8IV53 801 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 SCUBE3Q8IX30 993 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 ACDQ96AP0 544 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 PLD4Q96BZ4 506 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 DCLK3Q9C098 648 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 TAB2Q9NYJ8 693 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 MARK1Q9P0L2 795 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 DEC1Q9P2X7 70 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 SFMBT1Q9UHJ3 866 aa15.28■□□□□ 0.04
ERCC1-203ENST00000340192 CYTH4Q9UIA0 394 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms