RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 PIGVQ9NUD9 493 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 DDIT4Q9NX09 232 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 RRN3Q9NYV6 651 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 STK39Q9UEW8 545 aa15.31■□□□□ 0.04
CBX3-201ENST00000337620 MDM4O15151 490 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 ABLIM3O94929 683 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 RTN3O95197 1032 aaPredicted RBP15.3■□□□□ 0.04
CBX3-201ENST00000337620 SEC24AO95486 1093 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 ATF2P15336 505 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 CTNNB1P35222 781 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 PTPN7P35236 360 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 DYNLT1P63172 113 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 MMRN1Q13201 1228 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 KCTD19Q17RG1 926 aaPredicted RBP15.3■□□□□ 0.04
CBX3-201ENST00000337620 PPP6R3Q5H9R7 873 aaPredicted RBP15.3■□□□□ 0.04
CBX3-201ENST00000337620 TPGS2Q68CL5 300 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 BNIPLQ7Z465 357 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 MON1AQ86VX9 555 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 ATG4AQ8WYN0 398 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 FBXO32Q969P5 355 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 FAM118BQ9BPY3 351 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 SLITRK6Q9H5Y7 841 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 DHX35Q9H5Z1 703 aaKnown RBP15.3■□□□□ 0.04
CBX3-201ENST00000337620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.3■□□□□ 0.042e-20■■■■■ 40.5
CBX3-201ENST00000337620 MAGED2Q9UNF1 606 aaPredicted RBP15.3■□□□□ 0.04
CBX3-201ENST00000337620 AP4E1Q9UPM8 1137 aa15.3■□□□□ 0.04
CBX3-201ENST00000337620 R3HDM2Q9Y2K5 976 aaKnown RBP15.3■□□□□ 0.04
CBX3-201ENST00000337620 TARSL2A2RTX5 802 aaKnown RBP15.29■□□□□ 0.04
CBX3-201ENST00000337620 CSPG5O95196 566 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 ATF6P18850 670 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 CHRNA3P32297 505 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 BMPR1AP36894 532 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 SNX1Q13596 522 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 PDK2Q15119 407 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 C9orf50Q5SZB4 431 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 COL13A1Q5TAT6 717 aaPredicted RBP15.29■□□□□ 0.04
CBX3-201ENST00000337620 CCDC137Q6PK04 289 aaKnown RBP15.29■□□□□ 0.04
CBX3-201ENST00000337620 TMC7Q7Z402 723 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 MAATS1Q7Z4T9 603 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 RFX6Q8HWS3 928 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 DQX1Q8TE96 717 aaKnown RBP15.29■□□□□ 0.04
CBX3-201ENST00000337620 MAK16Q9BXY0 300 aaKnown RBP15.29■□□□□ 0.04
CBX3-201ENST00000337620 MAGEB5Q9BZ81 275 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 ZBP1Q9H171 429 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 ALG13Q9NP73 1137 aaKnown RBP15.29■□□□□ 0.04
CBX3-201ENST00000337620 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.29■□□□□ 0.04
CBX3-201ENST00000337620 GMIPQ9P107 970 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 STIM2Q9P246 746 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 NUDT5Q9UKK9 219 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 SLC38A8A6NNN8 435 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 TEX28O15482 410 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 CST8O60676 142 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 HEXIM1O94992 359 aaKnown RBP15.29■□□□□ 0.04
CBX3-201ENST00000337620 CTSAP10619 480 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 KCNJ1P48048 391 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 ARSEP51690 589 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 TAF10Q12962 218 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 RAB33AQ14088 237 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 DPYSL3Q14195 570 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 CYP1B1Q16678 543 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 TTC27Q6P3X3 843 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 SND1Q7KZF4 910 aaKnown RBP eCLIP15.29■□□□□ 0.043e-6■■□□□ 13
CBX3-201ENST00000337620 BEND5Q7L4P6 421 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 TAC4Q86UU9 113 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 CCDC105Q8IYK2 499 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 RNF139Q8WU17 664 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 ANKRD7Q92527 254 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 HAUS1Q96CS2 278 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 PCDH18Q9HCL0 1135 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 TMPRSS4Q9NRS4 437 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 OSER1Q9NX31 292 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 IL37Q9NZH6 218 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 FZD10Q9ULW2 581 aa15.29■□□□□ 0.04
CBX3-201ENST00000337620 MYO16Q9Y6X6 1858 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 GRXCR1A8MXD5 290 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 TTI1O43156 1089 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 CXCL14O95715 111 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 F9P00740 461 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 MYOGP15173 224 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 L1CAMP32004 1257 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 ELF1P32519 619 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 COILP38432 576 aaPredicted RBP15.28■□□□□ 0.04
CBX3-201ENST00000337620 VSNL1P62760 191 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 DR1Q01658 176 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 GUCY2DQ02846 1103 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 TAZQ16635 292 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 RASIP1Q5U651 963 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 ARHGAP18Q8N392 663 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 RNF34Q969K3 372 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 PGAP3Q96FM1 320 aaPredicted RBP15.28■□□□□ 0.04
CBX3-201ENST00000337620 DCLK3Q9C098 648 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 LRRC19Q9H756 370 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 FNIP2Q9P278 1114 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 SFMBT1Q9UHJ3 866 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 SSX2IPQ9Y2D8 614 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 EFR3BQ9Y2G0 817 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 LINC01553A4QN01 128 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 PRRG1O14668 218 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 LILRB3O75022 631 aa15.28■□□□□ 0.04
CBX3-201ENST00000337620 GBP1P32455 592 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms