RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TMEM176AQ96HP8 235 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 CLMNQ96JQ2 1002 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 WDR83Q9BRX9 315 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 PIH1D1Q9NWS0 290 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 NMRK1Q9NWW6 199 aa17.13■□□□□ 0.33
CDC42EP4-201ENST00000335793 RBBP6Q7Z6E9 1792 aaKnown RBP17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 ARHGAP42A6NI28 874 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 C3orf70A6NLC5 250 aaPredicted RBP17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 LMNAP02545 664 aaKnown RBP17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 CNPY1Q3B7I2 92 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 TTC39BQ5VTQ0 682 aaPredicted RBP17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 ARHGAP24Q8N264 748 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 NIPA2Q8N8Q9 360 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 OXNAD1Q96HP4 312 aaPredicted RBP17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 TTC1Q99614 292 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 NMUR2Q9GZQ4 415 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 VCX3BQ9H321 246 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 VCX3AQ9NNX9 186 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 FAM49BQ9NUQ9 324 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 TDRKHQ9Y2W6 561 aaKnown RBP17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 NUMBLQ9Y6R0 609 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 TCRBV5S1A1TA0A578 114 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 E5RJQ4 531 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 HMGCRP04035 888 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 LBRQ14739 615 aaKnown RBP17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 C12orf29Q8N999 325 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 E2F7Q96AV8 911 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 SPATA33Q96N06 139 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 THTPAQ9BU02 230 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 AKT3Q9Y243 479 aa17.12■□□□□ 0.33
CDC42EP4-201ENST00000335793 A6NJR5 290 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 LACTBL1A8MY62 500 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 P4HA1P13674 534 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 GNAZP19086 355 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 MCCD1P59942 119 aaPredicted RBP17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 RINLQ6ZS11 566 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 ARHGAP18Q8N392 663 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 SLC44A1Q8WWI5 657 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 XYLT2Q9H1B5 865 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 TAS2R1Q9NYW7 299 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 SYNJ2BP-COX16A0A087WUM0 186 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 CCDC160A6NGH7 325 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 UGT1A9O60656 530 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 CIB2O75838 187 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 GJA8P48165 433 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 OLFML1Q6UWY5 402 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 CDHR3Q6ZTQ4 885 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 CRLF3Q8IUI8 442 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 HPDLQ96IR7 371 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 ZBED3Q96IU2 234 aaPredicted RBP17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 CPB2Q96IY4 423 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 ELOVL4Q9GZR5 314 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 C2orf40Q9H1Z8 148 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 UGT1A7Q9HAW7 530 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 UGT1A10Q9HAW8 530 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 UGT1A8Q9HAW9 530 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 COX16Q9P0S2 106 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 PAK5Q9P286 719 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 E2F8A0AVK6 867 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 APOL1O14791 398 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 KRT38O76015 456 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 AQP5P55064 265 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 BST1Q10588 318 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 PABPC1LQ4VXU2 614 aaKnown RBP17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 ATG16L1Q676U5 607 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 JADE1Q6IE81 842 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 C1orf127Q8N9H9 656 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 DEPDC1BQ8WUY9 529 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 FAM167AQ96KS9 214 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 PHF12Q96QT6 1004 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 SDCBP2Q9H190 292 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 DHX35Q9H5Z1 703 aaKnown RBP17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 EFR3BQ9Y2G0 817 aa17.11■□□□□ 0.33
CDC42EP4-201ENST00000335793 MAGEA13PA6NCF6 341 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 CXorf49A8MYA2 514 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 HNRNPCL1O60812 293 aaKnown RBP17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 STAG3L1P0CL83 205 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 SKIP12755 728 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 SDC4P31431 198 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 VHLP40337 213 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 SFSWAPQ12872 951 aaKnown RBP17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 SCUBE3Q8IX30 993 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 SLC4A11Q8NBS3 891 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 DNERQ8NFT8 737 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 COPS5Q92905 334 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 PIWIL1Q96J94 861 aaKnown RBP17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 CNPY3Q9BT09 278 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 FRMD8P1Q9BZ68 369 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 ARHGEF38Q9NXL2 777 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 DOCK5Q9H7D0 1870 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 PTPN7P35236 360 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 ACSBG2Q5FVE4 666 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 DLK2Q6UY11 383 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 CMASQ8NFW8 434 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 ZNF398Q8TD17 642 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 SCG3Q8WXD2 468 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms