RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 ITIH4Q14624 930 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 SKIDA1Q1XH10 827 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 C15orf59Q2T9L4 293 aaPredicted RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 KLHL38Q2WGJ6 581 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 ZC3H12AQ5D1E8 599 aaKnown RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 EFHC2Q5JST6 749 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 MAP3K21Q5TCX8 1036 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 GKAP1Q5VSY0 366 aaPredicted RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 MFSD14CQ5VZR4 134 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 TWF2Q6IBS0 349 aaKnown RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 TRNP1Q6NT89 227 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 ARHGEF18Q6ZSZ5 1173 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 BZW1Q7L1Q6 419 aaKnown RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 NECAB2Q7Z6G3 386 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 CACNA2D3Q8IZS8 1091 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 PDIK1LQ8N165 341 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 TMEM130Q8N3G9 435 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 GLIS1Q8NBF1 620 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 UHMK1Q8TAS1 419 aaKnown RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 CPT1BQ92523 772 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 ZDHHC16Q969W1 377 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 SGSM3Q96HU1 749 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 C9orf72Q96LT7 481 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 PPP1R10Q96QC0 940 aaKnown RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 SNRNP25Q9BV90 132 aaKnown RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 APOL6Q9BWW8 343 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 PCDH18Q9HCL0 1135 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 SSU72Q9NP77 194 aaKnown RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 NGRNQ9NPE2 291 aaKnown RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 FAM49BQ9NUQ9 324 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 OGDHLQ9ULD0 1010 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 HES2Q9Y543 173 aa9.32□□□□□ -0.92
TREM1-202ENST00000334475 TDRD15B5MCY1 1934 aaKnown RBP9.32□□□□□ -0.92
TREM1-202ENST00000334475 SF3B1O75533 1304 aaKnown RBP eCLIP9.31□□□□□ -0.92
TREM1-202ENST00000334475 GABRDO14764 452 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 FBXO21O94952 628 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 ZBED1O96006 694 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 ZSCAN5DPP0CG00 497 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 FGFR1P11362 822 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 ETS1P14921 441 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 DRD4P21917 467 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 CCND3P30281 292 aaPredicted RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 RPL9P32969 192 aaKnown RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 MAGEA6P43360 314 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 MAGEA9P43362 315 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 LHX1P48742 406 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 SEC24CP53992 1094 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 BCAR1P56945 870 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 LILRA4P59901 499 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 BEX3Q00994 111 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 PDIA2Q13087 525 aaKnown RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 CDO1Q16878 200 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 ANKRD20A8PQ5CZ79 823 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 UBAP2Q5T6F2 1119 aaKnown RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 DARS2Q6PI48 645 aaKnown RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 C6orf89Q6UWU4 347 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 VSTM1Q6UX27 236 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 CPLX4Q7Z7G2 160 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 ZBED8Q8IZ13 594 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 B3GALNT2Q8NCR0 500 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 PIWIL1Q96J94 861 aaKnown RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 FAM161BQ96MY7 647 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 ZNF317Q96PQ6 595 aaPredicted RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 DUSP16Q9BY84 665 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 CXCL16Q9H2A7 254 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 ACTR5Q9H9F9 607 aaPredicted RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 FAM105AQ9NUU6 356 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 RRN3Q9NYV6 651 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.31□□□□□ -0.92
TREM1-202ENST00000334475 PSMC3IPQ9P2W1 217 aaPredicted RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 STAP1Q9ULZ2 295 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 SMG5Q9UPR3 1016 aaKnown RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 NAALADL1Q9UQQ1 740 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 GIT1Q9Y2X7 761 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 CDY2AQ9Y6F7 541 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 COL4A4P53420 1690 aaPredicted RBP9.31□□□□□ -0.92
TREM1-202ENST00000334475 FRMPD3Q5JV73 1810 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 PATJQ8NI35 1801 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 CLUHO75153 1309 aa9.31□□□□□ -0.92
TREM1-202ENST00000334475 TMEM120BA0PK00 339 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 ARHGEF37A1IGU5 675 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 HACD1B0YJ81 288 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 H7C0C1 242 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 PTGESO14684 152 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 GPR182O15218 404 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 SPTLC1O15269 473 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 PRPF4O43172 522 aaKnown RBP eCLIP9.3□□□□□ -0.92
TREM1-202ENST00000334475 ZNF623O75123 536 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 CPP00450 1065 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 GSTA2P09210 222 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 C6orf222P0C671 652 aaPredicted RBP9.3□□□□□ -0.92
TREM1-202ENST00000334475 CCDC130P13994 396 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 BRAFP15056 766 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 NPR3P17342 541 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 IL4RP24394 825 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 ADORA2BP29275 332 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 NOS2P35228 1153 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 MATKP42679 507 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 ATP5OP48047 213 aa9.3□□□□□ -0.92
TREM1-202ENST00000334475 ZNF135P52742 658 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms